Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
NR1H2P55055 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NR1H2P55055 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
NR1H2P55055 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.79■□□□□ 0.6
NR1H2P55055 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NR1H2P55055 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
NR1H2P55055 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
NR1H2P55055 AC079140.4-201ENST00000507448 529 ntBASIC18.79■□□□□ 0.6
NR1H2P55055 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.79■□□□□ 0.6
NR1H2P55055 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.79■□□□□ 0.6
NR1H2P55055 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR1H2P55055 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.79■□□□□ 0.6
NR1H2P55055 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
NR1H2P55055 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.79■□□□□ 0.6
NR1H2P55055 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NR1H2P55055 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR1H2P55055 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR1H2P55055 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NR1H2P55055 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.78■□□□□ 0.6
NR1H2P55055 AP004607.4-201ENST00000530158 1459 ntBASIC18.78■□□□□ 0.6
NR1H2P55055 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
NR1H2P55055 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.78■□□□□ 0.6
NR1H2P55055 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NR1H2P55055 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NR1H2P55055 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.78■□□□□ 0.6
NR1H2P55055 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.78■□□□□ 0.6
NR1H2P55055 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NR1H2P55055 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NR1H2P55055 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.78■□□□□ 0.6
NR1H2P55055 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
NR1H2P55055 AL138781.2-201ENST00000617896 1843 ntBASIC18.78■□□□□ 0.6
NR1H2P55055 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.78■□□□□ 0.6
NR1H2P55055 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NR1H2P55055 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR1H2P55055 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.77■□□□□ 0.6
NR1H2P55055 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 AC009237.3-201ENST00000393279 1427 ntBASIC18.77■□□□□ 0.6
NR1H2P55055 AC004854.2-201ENST00000608450 1441 ntBASIC18.77■□□□□ 0.6
NR1H2P55055 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 ID1-201ENST00000376105 1233 ntBASIC18.77■□□□□ 0.6
NR1H2P55055 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.77■□□□□ 0.6
NR1H2P55055 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.77■□□□□ 0.6
NR1H2P55055 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.77■□□□□ 0.6
NR1H2P55055 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 AC120498.9-201ENST00000339021 3867 ntBASIC18.77■□□□□ 0.6
NR1H2P55055 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NR1H2P55055 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
NR1H2P55055 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
NR1H2P55055 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NR1H2P55055 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.77■□□□□ 0.59
NR1H2P55055 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NR1H2P55055 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
NR1H2P55055 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.76■□□□□ 0.59
NR1H2P55055 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.76■□□□□ 0.59
NR1H2P55055 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
NR1H2P55055 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
NR1H2P55055 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H2P55055 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H2P55055 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H2P55055 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.76■□□□□ 0.59
NR1H2P55055 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NR1H2P55055 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.76■□□□□ 0.59
NR1H2P55055 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.76■□□□□ 0.59
NR1H2P55055 KRT18P11-201ENST00000435214 1283 ntBASIC18.76■□□□□ 0.59
NR1H2P55055 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.76■□□□□ 0.59
NR1H2P55055 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.76■□□□□ 0.59
NR1H2P55055 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NR1H2P55055 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H2P55055 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H2P55055 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.76■□□□□ 0.59
NR1H2P55055 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NR1H2P55055 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H2P55055 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.76■□□□□ 0.59
NR1H2P55055 AC079598.2-202ENST00000546624 1451 ntBASIC18.76■□□□□ 0.59
NR1H2P55055 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H2P55055 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NR1H2P55055 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NR1H2P55055 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H2P55055 Z82202.1-201ENST00000623446 1880 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms