Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF144AP50876 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF144AP50876 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF144AP50876 GPX1P1-201ENST00000388829 606 ntBASIC18.46■□□□□ 0.55
RNF144AP50876 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RNF144AP50876 NCF1B-203ENST00000435988 1254 ntBASIC18.46■□□□□ 0.55
RNF144AP50876 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF144AP50876 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF144AP50876 C2orf69P4-201ENST00000565394 541 ntBASIC18.46■□□□□ 0.55
RNF144AP50876 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF144AP50876 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF144AP50876 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF144AP50876 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RNF144AP50876 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.46■□□□□ 0.55
RNF144AP50876 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF144AP50876 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF144AP50876 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RNF144AP50876 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF144AP50876 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF144AP50876 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF144AP50876 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF144AP50876 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RNF144AP50876 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF144AP50876 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF144AP50876 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 BX119927.1-201ENST00000636596 1552 ntBASIC18.45■□□□□ 0.54
RNF144AP50876 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF144AP50876 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF144AP50876 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF144AP50876 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF144AP50876 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF144AP50876 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF144AP50876 SLC29A4P1-201ENST00000398760 971 ntBASIC18.44■□□□□ 0.54
RNF144AP50876 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.44■□□□□ 0.54
RNF144AP50876 DUSP5P2-201ENST00000426873 1033 ntBASIC18.44■□□□□ 0.54
RNF144AP50876 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
RNF144AP50876 TSPY6P-201ENST00000448518 926 ntBASIC18.44■□□□□ 0.54
RNF144AP50876 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF144AP50876 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF144AP50876 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF144AP50876 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
RNF144AP50876 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF144AP50876 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
RNF144AP50876 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF144AP50876 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RNF144AP50876 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF144AP50876 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF144AP50876 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
RNF144AP50876 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF144AP50876 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF144AP50876 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF144AP50876 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RNF144AP50876 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF144AP50876 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF144AP50876 AL109923.1-201ENST00000618799 583 ntBASIC18.43■□□□□ 0.54
RNF144AP50876 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF144AP50876 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
RNF144AP50876 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF144AP50876 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF144AP50876 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF144AP50876 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF144AP50876 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF144AP50876 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms