Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC9A3P48764 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC9A3P48764 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC9A3P48764 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC9A3P48764 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC9A3P48764 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC9A3P48764 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC9A3P48764 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SLC9A3P48764 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SLC9A3P48764 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC9A3P48764 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC9A3P48764 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC9A3P48764 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC9A3P48764 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC9A3P48764 AC137761.2-201ENST00000561729 223 ntBASIC18.18■□□□□ 0.5
SLC9A3P48764 AC145350.3-201ENST00000569033 163 ntBASIC18.18■□□□□ 0.5
SLC9A3P48764 AC100791.3-201ENST00000617619 330 ntBASIC18.18■□□□□ 0.5
SLC9A3P48764 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC9A3P48764 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC9A3P48764 TMEM179-206ENST00000616017 1645 ntBASIC18.18■□□□□ 0.5
SLC9A3P48764 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC9A3P48764 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC9A3P48764 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC9A3P48764 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC9A3P48764 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.18■□□□□ 0.5
SLC9A3P48764 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC9A3P48764 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SLC9A3P48764 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC9A3P48764 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC9A3P48764 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC9A3P48764 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC9A3P48764 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC9A3P48764 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC9A3P48764 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC9A3P48764 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC9A3P48764 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC9A3P48764 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SLC9A3P48764 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC9A3P48764 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SLC9A3P48764 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC9A3P48764 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC9A3P48764 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC9A3P48764 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC9A3P48764 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 AP000974.1-201ENST00000623909 2387 ntBASIC18.16■□□□□ 0.5
SLC9A3P48764 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
SLC9A3P48764 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC9A3P48764 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC9A3P48764 AC087623.3-201ENST00000607047 1098 ntBASIC18.16■□□□□ 0.5
SLC9A3P48764 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC9A3P48764 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SLC9A3P48764 TNXA-203ENST00000507684 2038 ntBASIC18.16■□□□□ 0.5
SLC9A3P48764 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC9A3P48764 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC9A3P48764 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC9A3P48764 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC9A3P48764 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC9A3P48764 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC9A3P48764 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms