Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
SLC1A3P43003 PTBP1P-201ENST00000554374 1601 ntBASIC18.27■□□□□ 0.52
SLC1A3P43003 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A3P43003 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
SLC1A3P43003 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A3P43003 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A3P43003 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A3P43003 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A3P43003 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SLC1A3P43003 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.27■□□□□ 0.52
SLC1A3P43003 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC1A3P43003 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A3P43003 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A3P43003 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC1A3P43003 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC1A3P43003 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC1A3P43003 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC1A3P43003 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SLC1A3P43003 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SLC1A3P43003 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC1A3P43003 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLC1A3P43003 AC116562.4-201ENST00000641316 2276 ntBASIC18.26■□□□□ 0.51
SLC1A3P43003 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A3P43003 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A3P43003 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A3P43003 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A3P43003 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A3P43003 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC1A3P43003 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A3P43003 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A3P43003 BX276092.2-201ENST00000417668 665 ntBASIC18.26■□□□□ 0.51
SLC1A3P43003 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC1A3P43003 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A3P43003 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A3P43003 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC1A3P43003 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC1A3P43003 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 BX119927.1-201ENST00000636596 1552 ntBASIC18.25■□□□□ 0.51
SLC1A3P43003 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC1A3P43003 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 AL020996.1-203ENST00000536896 2307 ntBASIC18.25■□□□□ 0.51
SLC1A3P43003 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SLC1A3P43003 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC1A3P43003 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC1A3P43003 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
SLC1A3P43003 NCF1B-203ENST00000435988 1254 ntBASIC18.25■□□□□ 0.51
SLC1A3P43003 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC1A3P43003 AC090192.1-201ENST00000517740 490 ntBASIC18.25■□□□□ 0.51
SLC1A3P43003 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.25■□□□□ 0.51
SLC1A3P43003 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC1A3P43003 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC1A3P43003 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SLC1A3P43003 AC018445.3-201ENST00000624177 1945 ntBASIC18.25■□□□□ 0.51
SLC1A3P43003 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SLC1A3P43003 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC1A3P43003 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SLC1A3P43003 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC1A3P43003 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC1A3P43003 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A3P43003 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A3P43003 KRT8P17-201ENST00000453110 1448 ntBASIC18.24■□□□□ 0.51
SLC1A3P43003 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A3P43003 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A3P43003 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A3P43003 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A3P43003 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC1A3P43003 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A3P43003 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SLC1A3P43003 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SLC1A3P43003 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A3P43003 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A3P43003 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A3P43003 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC1A3P43003 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC1A3P43003 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC1A3P43003 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC1A3P43003 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SLC1A3P43003 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SLC1A3P43003 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC1A3P43003 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
SLC1A3P43003 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.23■□□□□ 0.51
SLC1A3P43003 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SLC1A3P43003 AC125437.2-201ENST00000625180 2167 ntBASIC18.23■□□□□ 0.51
SLC1A3P43003 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms