Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCNFP41002 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCNFP41002 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 AP000974.1-201ENST00000623909 2387 ntBASIC19.99■□□□□ 0.79
CCNFP41002 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCNFP41002 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.99■□□□□ 0.79
CCNFP41002 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CCNFP41002 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.99■□□□□ 0.79
CCNFP41002 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.99■□□□□ 0.79
CCNFP41002 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.99■□□□□ 0.79
CCNFP41002 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.99■□□□□ 0.79
CCNFP41002 AC100791.3-201ENST00000617619 330 ntBASIC19.99■□□□□ 0.79
CCNFP41002 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCNFP41002 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCNFP41002 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CCNFP41002 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CCNFP41002 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCNFP41002 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCNFP41002 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.99■□□□□ 0.79
CCNFP41002 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNFP41002 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCNFP41002 TNXA-203ENST00000507684 2038 ntBASIC19.98■□□□□ 0.79
CCNFP41002 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCNFP41002 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNFP41002 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNFP41002 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.98■□□□□ 0.79
CCNFP41002 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.98■□□□□ 0.79
CCNFP41002 PGM5P4-201ENST00000421970 445 ntBASIC19.98■□□□□ 0.79
CCNFP41002 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CCNFP41002 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNFP41002 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.98■□□□□ 0.79
CCNFP41002 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.98■□□□□ 0.79
CCNFP41002 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.98■□□□□ 0.79
CCNFP41002 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNFP41002 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNFP41002 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNFP41002 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCNFP41002 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.98■□□□□ 0.79
CCNFP41002 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCNFP41002 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.97■□□□□ 0.79
CCNFP41002 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.97■□□□□ 0.79
CCNFP41002 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCNFP41002 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.97■□□□□ 0.79
CCNFP41002 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.97■□□□□ 0.79
CCNFP41002 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
CCNFP41002 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.97■□□□□ 0.79
CCNFP41002 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.97■□□□□ 0.79
CCNFP41002 AC133552.2-202ENST00000575694 574 ntBASIC19.97■□□□□ 0.79
CCNFP41002 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCNFP41002 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCNFP41002 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCNFP41002 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCNFP41002 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCNFP41002 MIR663A-201ENST00000385250 93 ntBASIC19.96■□□□□ 0.79
CCNFP41002 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.96■□□□□ 0.79
CCNFP41002 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
CCNFP41002 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCNFP41002 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCNFP41002 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCNFP41002 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.96■□□□□ 0.79
CCNFP41002 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCNFP41002 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCNFP41002 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCNFP41002 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CCNFP41002 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.95■□□□□ 0.78
CCNFP41002 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.95■□□□□ 0.78
CCNFP41002 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCNFP41002 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCNFP41002 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCNFP41002 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCNFP41002 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.95■□□□□ 0.78
CCNFP41002 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCNFP41002 AL512625.2-201ENST00000417533 625 ntBASIC19.95■□□□□ 0.78
CCNFP41002 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCNFP41002 AC006970.2-201ENST00000450065 779 ntBASIC19.95■□□□□ 0.78
CCNFP41002 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCNFP41002 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCNFP41002 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.95■□□□□ 0.78
CCNFP41002 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms