Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CLCN1P35523 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22.56■■□□□ 1.2
CLCN1P35523 AC139713.2-201ENST00000641328 2723 ntBASIC22.56■■□□□ 1.2
CLCN1P35523 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CLCN1P35523 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN1P35523 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CLCN1P35523 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.55■■□□□ 1.2
CLCN1P35523 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.55■■□□□ 1.2
CLCN1P35523 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.55■■□□□ 1.2
CLCN1P35523 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.55■■□□□ 1.2
CLCN1P35523 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.55■■□□□ 1.2
CLCN1P35523 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.55■■□□□ 1.2
CLCN1P35523 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN1P35523 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CLCN1P35523 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN1P35523 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN1P35523 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CLCN1P35523 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.54■■□□□ 1.2
CLCN1P35523 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN1P35523 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN1P35523 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.54■■□□□ 1.2
CLCN1P35523 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN1P35523 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN1P35523 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
CLCN1P35523 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC22.54■■□□□ 1.2
CLCN1P35523 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.54■■□□□ 1.2
CLCN1P35523 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.54■■□□□ 1.2
CLCN1P35523 AC027612.3-201ENST00000413684 1047 ntBASIC22.54■■□□□ 1.2
CLCN1P35523 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CLCN1P35523 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN1P35523 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.54■■□□□ 1.2
CLCN1P35523 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.54■■□□□ 1.2
CLCN1P35523 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN1P35523 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CLCN1P35523 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.54■■□□□ 1.2
CLCN1P35523 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN1P35523 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC22.53■■□□□ 1.2
CLCN1P35523 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.53■■□□□ 1.2
CLCN1P35523 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.53■■□□□ 1.2
CLCN1P35523 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.53■■□□□ 1.2
CLCN1P35523 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 ZNRF2P3-201ENST00000424200 374 ntBASIC22.53■■□□□ 1.2
CLCN1P35523 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.53■■□□□ 1.2
CLCN1P35523 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.53■■□□□ 1.2
CLCN1P35523 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.53■■□□□ 1.2
CLCN1P35523 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.53■■□□□ 1.2
CLCN1P35523 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
CLCN1P35523 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN1P35523 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.53■■□□□ 1.2
CLCN1P35523 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.52■■□□□ 1.2
CLCN1P35523 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
CLCN1P35523 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.52■■□□□ 1.2
CLCN1P35523 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.52■■□□□ 1.2
CLCN1P35523 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN1P35523 TREX1-205ENST00000625293 1783 ntBASIC22.52■■□□□ 1.2
CLCN1P35523 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC22.52■■□□□ 1.2
CLCN1P35523 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.52■■□□□ 1.2
CLCN1P35523 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.52■■□□□ 1.19
CLCN1P35523 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.19
CLCN1P35523 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CLCN1P35523 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN1P35523 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN1P35523 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC22.51■■□□□ 1.19
CLCN1P35523 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms