Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.98■□□□□ 0.95
CTNNA1P35221 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CTNNA1P35221 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTNNA1P35221 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNNA1P35221 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNNA1P35221 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNNA1P35221 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.97■□□□□ 0.95
CTNNA1P35221 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNNA1P35221 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
CTNNA1P35221 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTNNA1P35221 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNNA1P35221 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.97■□□□□ 0.95
CTNNA1P35221 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.97■□□□□ 0.95
CTNNA1P35221 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.97■□□□□ 0.95
CTNNA1P35221 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.97■□□□□ 0.95
CTNNA1P35221 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
CTNNA1P35221 MIR6821-201ENST00000617625 74 ntBASIC20.97■□□□□ 0.95
CTNNA1P35221 AP000974.1-201ENST00000623909 2387 ntBASIC20.97■□□□□ 0.95
CTNNA1P35221 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CTNNA1P35221 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTNNA1P35221 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNNA1P35221 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNNA1P35221 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNNA1P35221 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.96■□□□□ 0.95
CTNNA1P35221 TREX1-205ENST00000625293 1783 ntBASIC20.96■□□□□ 0.95
CTNNA1P35221 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNNA1P35221 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.96■□□□□ 0.95
CTNNA1P35221 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.96■□□□□ 0.95
CTNNA1P35221 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.96■□□□□ 0.95
CTNNA1P35221 MFSD11-216ENST00000590393 1141 ntBASIC20.96■□□□□ 0.95
CTNNA1P35221 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.96■□□□□ 0.95
CTNNA1P35221 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNNA1P35221 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNNA1P35221 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTNNA1P35221 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTNNA1P35221 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CTNNA1P35221 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.95■□□□□ 0.94
CTNNA1P35221 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.95■□□□□ 0.94
CTNNA1P35221 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.95■□□□□ 0.94
CTNNA1P35221 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
CTNNA1P35221 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.95■□□□□ 0.94
CTNNA1P35221 RARRES2P4-201ENST00000514074 484 ntBASIC20.95■□□□□ 0.94
CTNNA1P35221 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CTNNA1P35221 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CTNNA1P35221 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 AC087623.3-201ENST00000607047 1098 ntBASIC20.95■□□□□ 0.94
CTNNA1P35221 AC100791.3-201ENST00000617619 330 ntBASIC20.95■□□□□ 0.94
CTNNA1P35221 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.95■□□□□ 0.94
CTNNA1P35221 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CTNNA1P35221 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.95■□□□□ 0.94
CTNNA1P35221 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTNNA1P35221 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.94■□□□□ 0.94
CTNNA1P35221 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTNNA1P35221 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CTNNA1P35221 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
CTNNA1P35221 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CTNNA1P35221 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.94■□□□□ 0.94
CTNNA1P35221 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.94■□□□□ 0.94
CTNNA1P35221 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNNA1P35221 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNNA1P35221 MCRIP2P1-201ENST00000394346 511 ntBASIC20.94■□□□□ 0.94
CTNNA1P35221 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.94■□□□□ 0.94
CTNNA1P35221 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.94■□□□□ 0.94
CTNNA1P35221 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTNNA1P35221 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CTNNA1P35221 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.94■□□□□ 0.94
CTNNA1P35221 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTNNA1P35221 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTNNA1P35221 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.94■□□□□ 0.94
CTNNA1P35221 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNNA1P35221 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNNA1P35221 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CTNNA1P35221 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNNA1P35221 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNNA1P35221 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.93■□□□□ 0.94
CTNNA1P35221 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNNA1P35221 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.93■□□□□ 0.94
CTNNA1P35221 CNN2P6-201ENST00000439038 900 ntBASIC20.93■□□□□ 0.94
CTNNA1P35221 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.93■□□□□ 0.94
CTNNA1P35221 AC137761.2-201ENST00000561729 223 ntBASIC20.93■□□□□ 0.94
CTNNA1P35221 AC145350.3-201ENST00000569033 163 ntBASIC20.93■□□□□ 0.94
CTNNA1P35221 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.93■□□□□ 0.94
CTNNA1P35221 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CTNNA1P35221 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNNA1P35221 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNNA1P35221 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNNA1P35221 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTNNA1P35221 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.93■□□□□ 0.94
CTNNA1P35221 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms