Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSP1P33241 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LSP1P33241 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSP1P33241 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSP1P33241 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.95■□□□□ 0.78
LSP1P33241 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.95■□□□□ 0.78
LSP1P33241 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.95■□□□□ 0.78
LSP1P33241 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.95■□□□□ 0.78
LSP1P33241 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.95■□□□□ 0.78
LSP1P33241 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.95■□□□□ 0.78
LSP1P33241 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.95■□□□□ 0.78
LSP1P33241 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.95■□□□□ 0.78
LSP1P33241 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.95■□□□□ 0.78
LSP1P33241 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSP1P33241 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSP1P33241 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LSP1P33241 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSP1P33241 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSP1P33241 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSP1P33241 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSP1P33241 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSP1P33241 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSP1P33241 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LSP1P33241 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.94■□□□□ 0.78
LSP1P33241 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSP1P33241 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSP1P33241 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSP1P33241 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSP1P33241 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LSP1P33241 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LSP1P33241 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.94■□□□□ 0.78
LSP1P33241 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LSP1P33241 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSP1P33241 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
LSP1P33241 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.94■□□□□ 0.78
LSP1P33241 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.94■□□□□ 0.78
LSP1P33241 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LSP1P33241 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSP1P33241 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LSP1P33241 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSP1P33241 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSP1P33241 NOC2LP2-201ENST00000407594 1944 ntBASIC19.94■□□□□ 0.78
LSP1P33241 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSP1P33241 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSP1P33241 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LSP1P33241 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LSP1P33241 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LSP1P33241 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LSP1P33241 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LSP1P33241 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.93■□□□□ 0.78
LSP1P33241 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 AC009237.14-201ENST00000609975 1594 ntBASIC19.93■□□□□ 0.78
LSP1P33241 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.93■□□□□ 0.78
LSP1P33241 KRT16P3-201ENST00000439127 1283 ntBASIC19.93■□□□□ 0.78
LSP1P33241 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.93■□□□□ 0.78
LSP1P33241 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.93■□□□□ 0.78
LSP1P33241 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LSP1P33241 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.93■□□□□ 0.78
LSP1P33241 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LSP1P33241 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LSP1P33241 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LSP1P33241 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSP1P33241 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSP1P33241 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSP1P33241 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSP1P33241 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.92■□□□□ 0.78
LSP1P33241 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSP1P33241 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LSP1P33241 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSP1P33241 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSP1P33241 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.92■□□□□ 0.78
LSP1P33241 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.92■□□□□ 0.78
LSP1P33241 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.92■□□□□ 0.78
LSP1P33241 RARRES2P11-201ENST00000635158 484 ntBASIC19.92■□□□□ 0.78
LSP1P33241 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LSP1P33241 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSP1P33241 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSP1P33241 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.92■□□□□ 0.78
LSP1P33241 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSP1P33241 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSP1P33241 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.92■□□□□ 0.78
LSP1P33241 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LSP1P33241 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LSP1P33241 AC090164.3-201ENST00000610780 2143 ntBASIC19.91■□□□□ 0.78
LSP1P33241 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSP1P33241 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.91■□□□□ 0.78
LSP1P33241 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms