Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHRNA3P32297 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.93■□□□□ 0.94
CHRNA3P32297 AC007322.3-201ENST00000426526 701 ntBASIC20.93■□□□□ 0.94
CHRNA3P32297 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.93■□□□□ 0.94
CHRNA3P32297 AC098934.4-201ENST00000564127 592 ntBASIC20.93■□□□□ 0.94
CHRNA3P32297 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.93■□□□□ 0.94
CHRNA3P32297 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHRNA3P32297 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
CHRNA3P32297 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.93■□□□□ 0.94
CHRNA3P32297 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.93■□□□□ 0.94
CHRNA3P32297 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CHRNA3P32297 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.93■□□□□ 0.94
CHRNA3P32297 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA3P32297 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CHRNA3P32297 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA3P32297 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CHRNA3P32297 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA3P32297 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.92■□□□□ 0.94
CHRNA3P32297 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.92■□□□□ 0.94
CHRNA3P32297 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA3P32297 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRNA3P32297 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRNA3P32297 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA3P32297 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRNA3P32297 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA3P32297 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.91■□□□□ 0.94
CHRNA3P32297 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CHRNA3P32297 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CHRNA3P32297 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CHRNA3P32297 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.91■□□□□ 0.94
CHRNA3P32297 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CHRNA3P32297 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CHRNA3P32297 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CHRNA3P32297 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.91■□□□□ 0.94
CHRNA3P32297 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.91■□□□□ 0.94
CHRNA3P32297 AC092118.2-201ENST00000613495 667 ntBASIC20.91■□□□□ 0.94
CHRNA3P32297 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.91■□□□□ 0.94
CHRNA3P32297 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA3P32297 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA3P32297 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CHRNA3P32297 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CHRNA3P32297 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CHRNA3P32297 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHRNA3P32297 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA3P32297 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CHRNA3P32297 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA3P32297 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHRNA3P32297 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA3P32297 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA3P32297 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CHRNA3P32297 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.9■□□□□ 0.94
CHRNA3P32297 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.9■□□□□ 0.94
CHRNA3P32297 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.9■□□□□ 0.94
CHRNA3P32297 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CHRNA3P32297 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA3P32297 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA3P32297 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CHRNA3P32297 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.89■□□□□ 0.94
CHRNA3P32297 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA3P32297 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA3P32297 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA3P32297 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA3P32297 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.89■□□□□ 0.94
CHRNA3P32297 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA3P32297 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA3P32297 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.89■□□□□ 0.93
CHRNA3P32297 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.89■□□□□ 0.93
CHRNA3P32297 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA3P32297 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms