Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.59■■□□□ 1.21
CTGFP29279 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.59■■□□□ 1.21
CTGFP29279 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.59■■□□□ 1.21
CTGFP29279 AC011558.1-201ENST00000623459 338 ntBASIC22.59■■□□□ 1.21
CTGFP29279 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CTGFP29279 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CTGFP29279 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CTGFP29279 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.58■■□□□ 1.21
CTGFP29279 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTGFP29279 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTGFP29279 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CTGFP29279 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTGFP29279 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTGFP29279 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTGFP29279 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CTGFP29279 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC22.58■■□□□ 1.21
CTGFP29279 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
CTGFP29279 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.58■■□□□ 1.21
CTGFP29279 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.58■■□□□ 1.21
CTGFP29279 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
CTGFP29279 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CTGFP29279 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CTGFP29279 RCC2P6-201ENST00000526625 1557 ntBASIC22.58■■□□□ 1.2
CTGFP29279 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CTGFP29279 GUSBP5-202ENST00000510805 1989 ntBASIC22.58■■□□□ 1.2
CTGFP29279 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
CTGFP29279 KRT8P17-201ENST00000453110 1448 ntBASIC22.57■■□□□ 1.2
CTGFP29279 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTGFP29279 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTGFP29279 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTGFP29279 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTGFP29279 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTGFP29279 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTGFP29279 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CTGFP29279 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.57■■□□□ 1.2
CTGFP29279 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.57■■□□□ 1.2
CTGFP29279 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.57■■□□□ 1.2
CTGFP29279 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC22.57■■□□□ 1.2
CTGFP29279 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.57■■□□□ 1.2
CTGFP29279 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.57■■□□□ 1.2
CTGFP29279 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.57■■□□□ 1.2
CTGFP29279 AC131212.4-201ENST00000623606 975 ntBASIC22.57■■□□□ 1.2
CTGFP29279 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CTGFP29279 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CTGFP29279 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.57■■□□□ 1.2
CTGFP29279 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.57■■□□□ 1.2
CTGFP29279 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CTGFP29279 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTGFP29279 AL121603.2-201ENST00000557373 2117 ntBASIC22.57■■□□□ 1.2
CTGFP29279 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CTGFP29279 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.57■■□□□ 1.2
CTGFP29279 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.56■■□□□ 1.2
CTGFP29279 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTGFP29279 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTGFP29279 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CTGFP29279 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
CTGFP29279 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTGFP29279 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC22.56■■□□□ 1.2
CTGFP29279 IPPK-202ENST00000375522 882 ntTSL 3 BASIC22.56■■□□□ 1.2
CTGFP29279 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CTGFP29279 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.56■■□□□ 1.2
CTGFP29279 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.56■■□□□ 1.2
CTGFP29279 COX11P1-201ENST00000489116 835 ntBASIC22.56■■□□□ 1.2
CTGFP29279 KRT18P16-201ENST00000510337 1294 ntBASIC22.56■■□□□ 1.2
CTGFP29279 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.56■■□□□ 1.2
CTGFP29279 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
CTGFP29279 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.55■■□□□ 1.2
CTGFP29279 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CTGFP29279 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTGFP29279 AL450487.1-201ENST00000426799 995 ntBASIC22.55■■□□□ 1.2
CTGFP29279 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.55■■□□□ 1.2
CTGFP29279 AC007663.1-201ENST00000438948 1240 ntBASIC22.55■■□□□ 1.2
CTGFP29279 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.55■■□□□ 1.2
CTGFP29279 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTGFP29279 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.55■■□□□ 1.2
CTGFP29279 AC093458.2-201ENST00000623150 629 ntBASIC22.55■■□□□ 1.2
CTGFP29279 AL121956.5-201ENST00000625261 221 ntBASIC22.55■■□□□ 1.2
CTGFP29279 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTGFP29279 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTGFP29279 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.55■■□□□ 1.2
CTGFP29279 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
CTGFP29279 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.55■■□□□ 1.2
CTGFP29279 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTGFP29279 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTGFP29279 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.55■■□□□ 1.2
CTGFP29279 TFP1-202ENST00000475455 1573 ntBASIC22.55■■□□□ 1.2
CTGFP29279 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTGFP29279 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CTGFP29279 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTGFP29279 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTGFP29279 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CTGFP29279 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTGFP29279 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTGFP29279 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTGFP29279 MFAP1P1-201ENST00000442257 1255 ntBASIC22.54■■□□□ 1.2
CTGFP29279 FAM207BP-201ENST00000447172 505 ntBASIC22.54■■□□□ 1.2
CTGFP29279 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CTGFP29279 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.54■■□□□ 1.2
CTGFP29279 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTGFP29279 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms