Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
KCNA3P22001 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
KCNA3P22001 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
KCNA3P22001 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC24.55■■□□□ 1.52
KCNA3P22001 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
KCNA3P22001 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC24.55■■□□□ 1.52
KCNA3P22001 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC24.55■■□□□ 1.52
KCNA3P22001 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC24.55■■□□□ 1.52
KCNA3P22001 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.55■■□□□ 1.52
KCNA3P22001 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.55■■□□□ 1.52
KCNA3P22001 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.55■■□□□ 1.52
KCNA3P22001 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.55■■□□□ 1.52
KCNA3P22001 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC24.54■■□□□ 1.52
KCNA3P22001 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KCNA3P22001 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
KCNA3P22001 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KCNA3P22001 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.54■■□□□ 1.52
KCNA3P22001 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
KCNA3P22001 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
KCNA3P22001 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC24.54■■□□□ 1.52
KCNA3P22001 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.54■■□□□ 1.52
KCNA3P22001 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24.54■■□□□ 1.52
KCNA3P22001 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
KCNA3P22001 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.54■■□□□ 1.52
KCNA3P22001 AC005332.1-201ENST00000577698 1310 ntBASIC24.54■■□□□ 1.52
KCNA3P22001 RCC2P6-201ENST00000526625 1557 ntBASIC24.54■■□□□ 1.52
KCNA3P22001 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
KCNA3P22001 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.53■■□□□ 1.52
KCNA3P22001 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.53■■□□□ 1.52
KCNA3P22001 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC24.53■■□□□ 1.52
KCNA3P22001 HCG4P8-203ENST00000443049 980 ntBASIC24.53■■□□□ 1.52
KCNA3P22001 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC24.53■■□□□ 1.52
KCNA3P22001 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC24.53■■□□□ 1.52
KCNA3P22001 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.53■■□□□ 1.52
KCNA3P22001 AC010653.2-201ENST00000623505 997 ntBASIC24.53■■□□□ 1.52
KCNA3P22001 CLN6-214ENST00000636314 442 ntTSL 3 BASIC24.53■■□□□ 1.52
KCNA3P22001 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC24.53■■□□□ 1.52
KCNA3P22001 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.53■■□□□ 1.52
KCNA3P22001 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
KCNA3P22001 AC096733.2-201ENST00000609937 1394 ntBASIC24.53■■□□□ 1.52
KCNA3P22001 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
KCNA3P22001 AC092338.2-201ENST00000568827 1415 ntBASIC24.52■■□□□ 1.52
KCNA3P22001 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
KCNA3P22001 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
KCNA3P22001 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.52■■□□□ 1.52
KCNA3P22001 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.52■■□□□ 1.52
KCNA3P22001 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.52■■□□□ 1.52
KCNA3P22001 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.52■■□□□ 1.52
KCNA3P22001 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
KCNA3P22001 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC24.52■■□□□ 1.52
KCNA3P22001 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC24.52■■□□□ 1.52
KCNA3P22001 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC24.52■■□□□ 1.52
KCNA3P22001 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.51■■□□□ 1.51
KCNA3P22001 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.51■■□□□ 1.51
KCNA3P22001 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
KCNA3P22001 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
KCNA3P22001 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
KCNA3P22001 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
KCNA3P22001 SLC25A1P2-201ENST00000430693 912 ntBASIC24.51■■□□□ 1.51
KCNA3P22001 MFAP1P1-201ENST00000442257 1255 ntBASIC24.51■■□□□ 1.51
KCNA3P22001 PTK2-216ENST00000519881 863 ntTSL 3 BASIC24.51■■□□□ 1.51
KCNA3P22001 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.51■■□□□ 1.51
KCNA3P22001 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.51■■□□□ 1.51
KCNA3P22001 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
KCNA3P22001 NDUFV2-AS1-203ENST00000608008 779 ntBASIC24.51■■□□□ 1.51
KCNA3P22001 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
KCNA3P22001 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
KCNA3P22001 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
KCNA3P22001 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
KCNA3P22001 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
KCNA3P22001 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
KCNA3P22001 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
KCNA3P22001 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
KCNA3P22001 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
KCNA3P22001 CCR12P-201ENST00000446203 998 ntBASIC24.5■■□□□ 1.51
KCNA3P22001 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC24.5■■□□□ 1.51
KCNA3P22001 KRT18P16-201ENST00000510337 1294 ntBASIC24.5■■□□□ 1.51
KCNA3P22001 CYGB-204ENST00000589342 815 ntTSL 3 BASIC24.5■■□□□ 1.51
KCNA3P22001 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.5■■□□□ 1.51
KCNA3P22001 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
KCNA3P22001 AL023803.3-201ENST00000615559 522 ntBASIC24.5■■□□□ 1.51
KCNA3P22001 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.5■■□□□ 1.51
KCNA3P22001 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
KCNA3P22001 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
KCNA3P22001 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
KCNA3P22001 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
KCNA3P22001 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
KCNA3P22001 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
KCNA3P22001 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
KCNA3P22001 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms