Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CAPN3P20807 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.11■□□□□ 0.65
CAPN3P20807 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CAPN3P20807 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN3P20807 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CAPN3P20807 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.11■□□□□ 0.65
CAPN3P20807 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN3P20807 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN3P20807 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CAPN3P20807 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN3P20807 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN3P20807 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN3P20807 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN3P20807 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CAPN3P20807 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN3P20807 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 AC004854.2-201ENST00000608450 1441 ntBASIC19.1■□□□□ 0.65
CAPN3P20807 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CAPN3P20807 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.1■□□□□ 0.65
CAPN3P20807 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.1■□□□□ 0.65
CAPN3P20807 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.1■□□□□ 0.65
CAPN3P20807 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CAPN3P20807 TSPY20P-201ENST00000450910 630 ntBASIC19.1■□□□□ 0.65
CAPN3P20807 AC142086.2-201ENST00000569753 217 ntBASIC19.1■□□□□ 0.65
CAPN3P20807 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.1■□□□□ 0.65
CAPN3P20807 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CAPN3P20807 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CAPN3P20807 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CAPN3P20807 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CAPN3P20807 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CAPN3P20807 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CAPN3P20807 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.1■□□□□ 0.65
CAPN3P20807 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN3P20807 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CAPN3P20807 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPN3P20807 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPN3P20807 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CAPN3P20807 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.09■□□□□ 0.65
CAPN3P20807 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CAPN3P20807 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.09■□□□□ 0.65
CAPN3P20807 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.09■□□□□ 0.65
CAPN3P20807 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.09■□□□□ 0.65
CAPN3P20807 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CAPN3P20807 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.09■□□□□ 0.65
CAPN3P20807 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CAPN3P20807 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPN3P20807 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPN3P20807 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN3P20807 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPN3P20807 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN3P20807 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CAPN3P20807 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPN3P20807 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPN3P20807 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN3P20807 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN3P20807 CDV3P1-201ENST00000471403 739 ntBASIC19.08■□□□□ 0.64
CAPN3P20807 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN3P20807 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
CAPN3P20807 AL356652.1-201ENST00000615962 565 ntBASIC19.08■□□□□ 0.64
CAPN3P20807 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPN3P20807 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CAPN3P20807 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPN3P20807 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CAPN3P20807 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN3P20807 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CAPN3P20807 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN3P20807 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN3P20807 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN3P20807 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CAPN3P20807 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN3P20807 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN3P20807 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN3P20807 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN3P20807 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPN3P20807 KRT18P61-201ENST00000585825 1298 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms