Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GJA1P17302 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GJA1P17302 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.71■□□□□ 0.91
GJA1P17302 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.71■□□□□ 0.91
GJA1P17302 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.71■□□□□ 0.91
GJA1P17302 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
GJA1P17302 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
GJA1P17302 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
GJA1P17302 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.71■□□□□ 0.91
GJA1P17302 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GJA1P17302 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GJA1P17302 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GJA1P17302 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.71■□□□□ 0.91
GJA1P17302 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.71■□□□□ 0.91
GJA1P17302 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.71■□□□□ 0.91
GJA1P17302 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GJA1P17302 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
GJA1P17302 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
GJA1P17302 AC079834.2-201ENST00000609776 1949 ntBASIC20.7■□□□□ 0.91
GJA1P17302 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GJA1P17302 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GJA1P17302 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.7■□□□□ 0.9
GJA1P17302 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GJA1P17302 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.7■□□□□ 0.9
GJA1P17302 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GJA1P17302 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GJA1P17302 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
GJA1P17302 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.7■□□□□ 0.9
GJA1P17302 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
GJA1P17302 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.7■□□□□ 0.9
GJA1P17302 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GJA1P17302 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GJA1P17302 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GJA1P17302 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.69■□□□□ 0.9
GJA1P17302 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
GJA1P17302 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.69■□□□□ 0.9
GJA1P17302 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
GJA1P17302 MIR1238-201ENST00000408483 83 ntBASIC20.69■□□□□ 0.9
GJA1P17302 AL390955.1-201ENST00000428694 934 ntBASIC20.69■□□□□ 0.9
GJA1P17302 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.69■□□□□ 0.9
GJA1P17302 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.69■□□□□ 0.9
GJA1P17302 MIR6786-201ENST00000616843 113 ntBASIC20.69■□□□□ 0.9
GJA1P17302 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GJA1P17302 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GJA1P17302 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GJA1P17302 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GJA1P17302 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.69■□□□□ 0.9
GJA1P17302 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
GJA1P17302 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.69■□□□□ 0.9
GJA1P17302 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.69■□□□□ 0.9
GJA1P17302 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GJA1P17302 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.68■□□□□ 0.9
GJA1P17302 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.68■□□□□ 0.9
GJA1P17302 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GJA1P17302 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
GJA1P17302 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GJA1P17302 NIFKP9-201ENST00000419265 221 ntBASIC20.68■□□□□ 0.9
GJA1P17302 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GJA1P17302 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.68■□□□□ 0.9
GJA1P17302 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
GJA1P17302 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
GJA1P17302 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.68■□□□□ 0.9
GJA1P17302 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
GJA1P17302 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GJA1P17302 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GJA1P17302 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GJA1P17302 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GJA1P17302 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.67■□□□□ 0.9
GJA1P17302 UNC93B2-201ENST00000285383 730 ntBASIC20.67■□□□□ 0.9
GJA1P17302 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.67■□□□□ 0.9
GJA1P17302 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.67■□□□□ 0.9
GJA1P17302 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.67■□□□□ 0.9
GJA1P17302 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GJA1P17302 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.66■□□□□ 0.9
GJA1P17302 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GJA1P17302 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GJA1P17302 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.66■□□□□ 0.9
GJA1P17302 RN7SL850P-201ENST00000579959 291 ntBASIC20.66■□□□□ 0.9
GJA1P17302 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.66■□□□□ 0.9
GJA1P17302 AP006587.1-201ENST00000534129 1502 ntBASIC20.66■□□□□ 0.9
GJA1P17302 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GJA1P17302 AC092720.2-201ENST00000602388 1665 ntBASIC20.66■□□□□ 0.9
GJA1P17302 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.66■□□□□ 0.9
GJA1P17302 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GJA1P17302 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GJA1P17302 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.66■□□□□ 0.9
GJA1P17302 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GJA1P17302 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
GJA1P17302 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms