Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
TPRP12270 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.72■□□□□ 0.59
TPRP12270 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPRP12270 MRPL3P1-201ENST00000400109 1033 ntBASIC18.72■□□□□ 0.59
TPRP12270 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPRP12270 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.72■□□□□ 0.59
TPRP12270 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TPRP12270 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.72■□□□□ 0.59
TPRP12270 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPRP12270 AC116050.2-201ENST00000612102 1779 ntBASIC18.72■□□□□ 0.59
TPRP12270 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPRP12270 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPRP12270 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TPRP12270 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.71■□□□□ 0.59
TPRP12270 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TPRP12270 BX842568.4-201ENST00000421222 227 ntBASIC18.71■□□□□ 0.59
TPRP12270 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 AL512604.3-201ENST00000569583 964 ntBASIC18.71■□□□□ 0.59
TPRP12270 AL356652.1-201ENST00000615962 565 ntBASIC18.71■□□□□ 0.59
TPRP12270 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TPRP12270 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.71■□□□□ 0.59
TPRP12270 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.71■□□□□ 0.59
TPRP12270 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPRP12270 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TPRP12270 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TPRP12270 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPRP12270 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPRP12270 TSPY12P-201ENST00000421279 868 ntBASIC18.7■□□□□ 0.58
TPRP12270 KRT18P38-201ENST00000449496 1282 ntBASIC18.7■□□□□ 0.58
TPRP12270 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.7■□□□□ 0.58
TPRP12270 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPRP12270 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPRP12270 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TPRP12270 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TPRP12270 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPRP12270 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TPRP12270 AL590627.1-203ENST00000421194 1026 ntBASIC18.7■□□□□ 0.58
TPRP12270 PMS2P2-201ENST00000425039 1128 ntBASIC18.7■□□□□ 0.58
TPRP12270 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.7■□□□□ 0.58
TPRP12270 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.7■□□□□ 0.58
TPRP12270 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.7■□□□□ 0.58
TPRP12270 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.7■□□□□ 0.58
TPRP12270 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPRP12270 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TPRP12270 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TPRP12270 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TPRP12270 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 AP002383.4-201ENST00000442518 975 ntBASIC18.69■□□□□ 0.58
TPRP12270 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.69■□□□□ 0.58
TPRP12270 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TPRP12270 AP000692.2-201ENST00000608391 879 ntBASIC18.69■□□□□ 0.58
TPRP12270 AC096733.2-201ENST00000609937 1394 ntBASIC18.69■□□□□ 0.58
TPRP12270 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TPRP12270 ANOS2P-203ENST00000472227 1816 ntBASIC18.69■□□□□ 0.58
TPRP12270 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.69■□□□□ 0.58
TPRP12270 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TPRP12270 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TPRP12270 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.68■□□□□ 0.58
TPRP12270 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRP12270 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRP12270 YBX1P10-201ENST00000444752 975 ntBASIC18.68■□□□□ 0.58
TPRP12270 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.68■□□□□ 0.58
TPRP12270 AC092329.2-201ENST00000598402 547 ntBASIC18.68■□□□□ 0.58
TPRP12270 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TPRP12270 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TPRP12270 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRP12270 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TPRP12270 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRP12270 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.68■□□□□ 0.58
TPRP12270 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRP12270 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRP12270 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRP12270 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TPRP12270 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TPRP12270 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.68■□□□□ 0.58
TPRP12270 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.68■□□□□ 0.58
TPRP12270 AC079776.4-201ENST00000511039 504 ntBASIC18.68■□□□□ 0.58
TPRP12270 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.67■□□□□ 0.58
TPRP12270 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TPRP12270 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms