Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB2P05538 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 AC124283.5-201ENST00000624661 1809 ntBASIC20.2■□□□□ 0.82
HLA-DQB2P05538 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQB2P05538 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.2■□□□□ 0.82
HLA-DQB2P05538 PHGDH-210ENST00000641115 1638 ntBASIC20.2■□□□□ 0.82
HLA-DQB2P05538 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.19■□□□□ 0.82
HLA-DQB2P05538 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 SOX15-203ENST00000570788 1093 ntBASIC20.19■□□□□ 0.82
HLA-DQB2P05538 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DQB2P05538 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 TMEM179-206ENST00000616017 1645 ntBASIC20.18■□□□□ 0.82
HLA-DQB2P05538 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 RNA5SP413-201ENST00000516373 109 ntBASIC20.18■□□□□ 0.82
HLA-DQB2P05538 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.18■□□□□ 0.82
HLA-DQB2P05538 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 KRT18P6-201ENST00000555540 1265 ntBASIC20.17■□□□□ 0.82
HLA-DQB2P05538 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 AC125437.2-201ENST00000625180 2167 ntBASIC20.17■□□□□ 0.82
HLA-DQB2P05538 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB2P05538 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 UNC93B5-201ENST00000530315 699 ntBASIC20.16■□□□□ 0.82
HLA-DQB2P05538 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB2P05538 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms