Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.06■■□□□ 1.12
CD4P01730 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CD4P01730 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CD4P01730 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
CD4P01730 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CD4P01730 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CD4P01730 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CD4P01730 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.05■■□□□ 1.12
CD4P01730 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CD4P01730 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CD4P01730 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CD4P01730 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.05■■□□□ 1.12
CD4P01730 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.05■■□□□ 1.12
CD4P01730 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CD4P01730 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.05■■□□□ 1.12
CD4P01730 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.05■■□□□ 1.12
CD4P01730 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.05■■□□□ 1.12
CD4P01730 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CD4P01730 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CD4P01730 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.04■■□□□ 1.12
CD4P01730 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CD4P01730 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.04■■□□□ 1.12
CD4P01730 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CD4P01730 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.04■■□□□ 1.12
CD4P01730 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CD4P01730 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CD4P01730 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CD4P01730 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CD4P01730 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.04■■□□□ 1.12
CD4P01730 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.04■■□□□ 1.12
CD4P01730 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CD4P01730 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CD4P01730 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CD4P01730 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 AC026310.3-201ENST00000625186 2373 ntBASIC22.03■■□□□ 1.12
CD4P01730 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.03■■□□□ 1.12
CD4P01730 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.03■■□□□ 1.12
CD4P01730 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.03■■□□□ 1.12
CD4P01730 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.03■■□□□ 1.12
CD4P01730 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.03■■□□□ 1.12
CD4P01730 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.03■■□□□ 1.12
CD4P01730 AC010203.1-204ENST00000548782 407 ntBASIC22.03■■□□□ 1.12
CD4P01730 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.03■■□□□ 1.12
CD4P01730 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
CD4P01730 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
CD4P01730 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.03■■□□□ 1.12
CD4P01730 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CD4P01730 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CD4P01730 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD4P01730 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
CD4P01730 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.02■■□□□ 1.12
CD4P01730 HLA-G-202ENST00000376815 851 ntBASIC22.02■■□□□ 1.12
CD4P01730 HLA-G-203ENST00000376818 1127 ntBASIC22.02■■□□□ 1.12
CD4P01730 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.02■■□□□ 1.12
CD4P01730 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.02■■□□□ 1.12
CD4P01730 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CD4P01730 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.02■■□□□ 1.12
CD4P01730 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD4P01730 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD4P01730 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CD4P01730 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CD4P01730 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD4P01730 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD4P01730 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.01■■□□□ 1.11
CD4P01730 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 MESTP1-201ENST00000404287 994 ntBASIC22.01■■□□□ 1.11
CD4P01730 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CD4P01730 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.01■■□□□ 1.11
CD4P01730 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.01■■□□□ 1.11
CD4P01730 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
CD4P01730 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
CD4P01730 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.01■■□□□ 1.11
CD4P01730 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.01■■□□□ 1.11
CD4P01730 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.01■■□□□ 1.11
CD4P01730 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD4P01730 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms