Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFBP01127 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.11■□□□□ 0.81
PDGFBP01127 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.11■□□□□ 0.81
PDGFBP01127 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFBP01127 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFBP01127 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFBP01127 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.11■□□□□ 0.81
PDGFBP01127 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFBP01127 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PDGFBP01127 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PDGFBP01127 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFBP01127 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFBP01127 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PDGFBP01127 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFBP01127 HLA-G-202ENST00000376815 851 ntBASIC20.11■□□□□ 0.81
PDGFBP01127 HLA-G-203ENST00000376818 1127 ntBASIC20.11■□□□□ 0.81
PDGFBP01127 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFBP01127 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
PDGFBP01127 MFAP1P1-201ENST00000442257 1255 ntBASIC20.11■□□□□ 0.81
PDGFBP01127 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.11■□□□□ 0.81
PDGFBP01127 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PDGFBP01127 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.11■□□□□ 0.81
PDGFBP01127 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFBP01127 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.1■□□□□ 0.81
PDGFBP01127 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDGFBP01127 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDGFBP01127 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.1■□□□□ 0.81
PDGFBP01127 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.1■□□□□ 0.81
PDGFBP01127 TSPY21P-201ENST00000433481 731 ntBASIC20.1■□□□□ 0.81
PDGFBP01127 TSPY23P-201ENST00000440136 739 ntBASIC20.1■□□□□ 0.81
PDGFBP01127 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 CCR12P-201ENST00000446203 998 ntBASIC20.1■□□□□ 0.81
PDGFBP01127 KRT18P38-201ENST00000449496 1282 ntBASIC20.1■□□□□ 0.81
PDGFBP01127 HOMER2P1-201ENST00000455653 964 ntBASIC20.1■□□□□ 0.81
PDGFBP01127 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.1■□□□□ 0.81
PDGFBP01127 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.1■□□□□ 0.81
PDGFBP01127 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 AL441883.1-201ENST00000566170 1045 ntBASIC20.1■□□□□ 0.81
PDGFBP01127 AL023973.1-201ENST00000624619 620 ntBASIC20.1■□□□□ 0.81
PDGFBP01127 MIR2861-201ENST00000636310 90 ntBASIC20.1■□□□□ 0.81
PDGFBP01127 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 AP006587.1-201ENST00000534129 1502 ntBASIC20.1■□□□□ 0.81
PDGFBP01127 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PDGFBP01127 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.1■□□□□ 0.81
PDGFBP01127 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFBP01127 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
PDGFBP01127 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDGFBP01127 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.09■□□□□ 0.81
PDGFBP01127 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.09■□□□□ 0.81
PDGFBP01127 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.09■□□□□ 0.81
PDGFBP01127 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 AC011298.2-201ENST00000617989 482 ntBASIC20.09■□□□□ 0.81
PDGFBP01127 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
PDGFBP01127 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.09■□□□□ 0.81
PDGFBP01127 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.09■□□□□ 0.81
PDGFBP01127 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFBP01127 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.08■□□□□ 0.81
PDGFBP01127 RCC2P6-201ENST00000526625 1557 ntBASIC20.08■□□□□ 0.81
PDGFBP01127 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.08■□□□□ 0.81
PDGFBP01127 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.08■□□□□ 0.81
PDGFBP01127 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.08■□□□□ 0.81
PDGFBP01127 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDGFBP01127 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.08■□□□□ 0.81
PDGFBP01127 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PDGFBP01127 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
PDGFBP01127 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDGFBP01127 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.08■□□□□ 0.81
PDGFBP01127 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.08■□□□□ 0.81
PDGFBP01127 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.08■□□□□ 0.81
PDGFBP01127 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.08■□□□□ 0.81
PDGFBP01127 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.08■□□□□ 0.81
PDGFBP01127 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PDGFBP01127 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PDGFBP01127 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDGFBP01127 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PDGFBP01127 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PDGFBP01127 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PDGFBP01127 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.08■□□□□ 0.8
PDGFBP01127 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDGFBP01127 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.07■□□□□ 0.8
PDGFBP01127 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms