Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PGK1P00558 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.22■■□□□ 1.15
PGK1P00558 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGK1P00558 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGK1P00558 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PGK1P00558 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.22■■□□□ 1.15
PGK1P00558 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.22■■□□□ 1.15
PGK1P00558 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGK1P00558 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.22■■□□□ 1.15
PGK1P00558 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.22■■□□□ 1.15
PGK1P00558 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PGK1P00558 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.22■■□□□ 1.15
PGK1P00558 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PGK1P00558 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGK1P00558 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PGK1P00558 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.22■■□□□ 1.15
PGK1P00558 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.22■■□□□ 1.15
PGK1P00558 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PGK1P00558 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PGK1P00558 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGK1P00558 ATP5G1P1-201ENST00000448724 379 ntBASIC22.21■■□□□ 1.15
PGK1P00558 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.21■■□□□ 1.15
PGK1P00558 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.21■■□□□ 1.15
PGK1P00558 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.21■■□□□ 1.15
PGK1P00558 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.21■■□□□ 1.15
PGK1P00558 C2orf69P3-201ENST00000565542 1120 ntBASIC22.21■■□□□ 1.15
PGK1P00558 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.21■■□□□ 1.15
PGK1P00558 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PGK1P00558 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGK1P00558 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
PGK1P00558 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.21■■□□□ 1.15
PGK1P00558 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGK1P00558 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGK1P00558 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGK1P00558 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PGK1P00558 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
PGK1P00558 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PGK1P00558 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PGK1P00558 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
PGK1P00558 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.2■■□□□ 1.14
PGK1P00558 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PGK1P00558 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.2■■□□□ 1.14
PGK1P00558 AC011506.1-201ENST00000474329 610 ntBASIC22.2■■□□□ 1.14
PGK1P00558 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.2■■□□□ 1.14
PGK1P00558 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.2■■□□□ 1.14
PGK1P00558 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PGK1P00558 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
PGK1P00558 AL445675.2-201ENST00000620291 557 ntBASIC22.2■■□□□ 1.14
PGK1P00558 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PGK1P00558 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.2■■□□□ 1.14
PGK1P00558 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.2■■□□□ 1.14
PGK1P00558 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PGK1P00558 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.2■■□□□ 1.14
PGK1P00558 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.19■■□□□ 1.14
PGK1P00558 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PGK1P00558 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGK1P00558 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PGK1P00558 B3GAT3P1-201ENST00000471720 806 ntBASIC22.19■■□□□ 1.14
PGK1P00558 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.19■■□□□ 1.14
PGK1P00558 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.19■■□□□ 1.14
PGK1P00558 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.19■■□□□ 1.14
PGK1P00558 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGK1P00558 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGK1P00558 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGK1P00558 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGK1P00558 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGK1P00558 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGK1P00558 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PGK1P00558 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PGK1P00558 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
PGK1P00558 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PGK1P00558 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PGK1P00558 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
PGK1P00558 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PGK1P00558 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PGK1P00558 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.18■■□□□ 1.14
PGK1P00558 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PGK1P00558 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PGK1P00558 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PGK1P00558 INGX-201ENST00000359239 846 ntBASIC22.18■■□□□ 1.14
PGK1P00558 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PGK1P00558 EGLN1P1-201ENST00000531623 762 ntBASIC22.18■■□□□ 1.14
PGK1P00558 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PGK1P00558 AC026271.3-201ENST00000571884 352 ntBASIC22.18■■□□□ 1.14
PGK1P00558 AP005242.2-201ENST00000580065 1175 ntBASIC22.18■■□□□ 1.14
PGK1P00558 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.18■■□□□ 1.14
PGK1P00558 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PGK1P00558 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.18■■□□□ 1.14
PGK1P00558 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PGK1P00558 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.17■■□□□ 1.14
PGK1P00558 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PGK1P00558 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.17■■□□□ 1.14
PGK1P00558 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PGK1P00558 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PGK1P00558 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PGK1P00558 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.17■■□□□ 1.14
PGK1P00558 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.17■■□□□ 1.14
PGK1P00558 CRYGFP-201ENST00000418459 633 ntBASIC22.17■■□□□ 1.14
PGK1P00558 AC097488.1-201ENST00000507834 756 ntBASIC22.17■■□□□ 1.14
PGK1P00558 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms