Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SIX6O95475 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.64■□□□□ 0.25
SIX6O95475 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.64■□□□□ 0.25
SIX6O95475 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.64■□□□□ 0.25
SIX6O95475 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SIX6O95475 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.63■□□□□ 0.25
SIX6O95475 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.63■□□□□ 0.25
SIX6O95475 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 ABHD17AP5-201ENST00000580133 923 ntBASIC16.63■□□□□ 0.25
SIX6O95475 SMUG1P1-201ENST00000590640 811 ntBASIC16.63■□□□□ 0.25
SIX6O95475 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.63■□□□□ 0.25
SIX6O95475 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.63■□□□□ 0.25
SIX6O95475 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.63■□□□□ 0.25
SIX6O95475 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.63■□□□□ 0.25
SIX6O95475 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SIX6O95475 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SIX6O95475 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SIX6O95475 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIX6O95475 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SIX6O95475 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SIX6O95475 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX6O95475 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SIX6O95475 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX6O95475 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 TSPY9P-201ENST00000440215 945 ntBASIC16.62■□□□□ 0.25
SIX6O95475 TSPY11P-201ENST00000442607 1045 ntBASIC16.62■□□□□ 0.25
SIX6O95475 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.62■□□□□ 0.25
SIX6O95475 KRT125P-201ENST00000546827 989 ntBASIC16.62■□□□□ 0.25
SIX6O95475 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SIX6O95475 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX6O95475 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX6O95475 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX6O95475 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.62■□□□□ 0.25
SIX6O95475 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.62■□□□□ 0.25
SIX6O95475 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SIX6O95475 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
SIX6O95475 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIX6O95475 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 AP000997.3-201ENST00000623333 2250 ntBASIC16.61■□□□□ 0.25
SIX6O95475 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SIX6O95475 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SIX6O95475 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
SIX6O95475 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SIX6O95475 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.61■□□□□ 0.25
SIX6O95475 AP005435.1-201ENST00000529293 1178 ntBASIC16.61■□□□□ 0.25
SIX6O95475 HSD17B1P1-201ENST00000590052 955 ntBASIC16.61■□□□□ 0.25
SIX6O95475 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SIX6O95475 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SIX6O95475 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.61■□□□□ 0.25
SIX6O95475 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SIX6O95475 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.61■□□□□ 0.25
SIX6O95475 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIX6O95475 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 NOC2LP1-202ENST00000452600 2235 ntBASIC16.6■□□□□ 0.25
SIX6O95475 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms