Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC26.56■■□□□ 1.84
LTN1O94822 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LTN1O94822 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LTN1O94822 KRT18P16-201ENST00000510337 1294 ntBASIC26.56■■□□□ 1.84
LTN1O94822 CFL2-205ENST00000555765 632 ntTSL 2 BASIC26.56■■□□□ 1.84
LTN1O94822 NME3-204ENST00000563498 920 ntTSL 2 BASIC26.56■■□□□ 1.84
LTN1O94822 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC26.56■■□□□ 1.84
LTN1O94822 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
LTN1O94822 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
LTN1O94822 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
LTN1O94822 KRT18P22-201ENST00000402024 1347 ntBASIC26.55■■□□□ 1.84
LTN1O94822 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LTN1O94822 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
LTN1O94822 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC26.55■■□□□ 1.84
LTN1O94822 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC26.55■■□□□ 1.84
LTN1O94822 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LTN1O94822 FSCN1P1-201ENST00000568912 1481 ntBASIC26.54■■□□□ 1.84
LTN1O94822 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC26.54■■□□□ 1.84
LTN1O94822 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LTN1O94822 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LTN1O94822 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.54■■□□□ 1.84
LTN1O94822 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC26.54■■□□□ 1.84
LTN1O94822 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC26.53■■□□□ 1.84
LTN1O94822 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LTN1O94822 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC26.53■■□□□ 1.84
LTN1O94822 AC011506.1-201ENST00000474329 610 ntBASIC26.53■■□□□ 1.84
LTN1O94822 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
LTN1O94822 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LTN1O94822 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LTN1O94822 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
LTN1O94822 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
LTN1O94822 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LTN1O94822 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LTN1O94822 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LTN1O94822 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC26.53■■□□□ 1.84
LTN1O94822 TMA16-209ENST00000513272 803 ntTSL 2 BASIC26.53■■□□□ 1.84
LTN1O94822 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 AC004980.1-204ENST00000429707 299 ntBASIC26.52■■□□□ 1.84
LTN1O94822 DUX4L26-201ENST00000489078 1255 ntBASIC26.52■■□□□ 1.84
LTN1O94822 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC26.52■■□□□ 1.84
LTN1O94822 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC26.52■■□□□ 1.84
LTN1O94822 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
LTN1O94822 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
LTN1O94822 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.51■■□□□ 1.83
LTN1O94822 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LTN1O94822 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC26.51■■□□□ 1.83
LTN1O94822 ECEL1P2-202ENST00000465689 757 ntBASIC26.51■■□□□ 1.83
LTN1O94822 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.51■■□□□ 1.83
LTN1O94822 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LTN1O94822 AC005363.2-201ENST00000618631 242 ntBASIC26.51■■□□□ 1.83
LTN1O94822 AC006011.2-201ENST00000621313 1158 ntBASIC26.51■■□□□ 1.83
LTN1O94822 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.51■■□□□ 1.83
LTN1O94822 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LTN1O94822 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LTN1O94822 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC26.51■■□□□ 1.83
LTN1O94822 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LTN1O94822 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
LTN1O94822 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.51■■□□□ 1.83
LTN1O94822 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
LTN1O94822 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
LTN1O94822 LTBR-211ENST00000543190 785 ntTSL 3 BASIC26.51■■□□□ 1.83
LTN1O94822 AC010203.1-204ENST00000548782 407 ntBASIC26.51■■□□□ 1.83
LTN1O94822 AP005242.2-201ENST00000580065 1175 ntBASIC26.51■■□□□ 1.83
LTN1O94822 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LTN1O94822 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
LTN1O94822 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LTN1O94822 AC007225.1-201ENST00000566331 1836 ntBASIC26.5■■□□□ 1.83
LTN1O94822 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
LTN1O94822 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC26.5■■□□□ 1.83
LTN1O94822 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC26.5■■□□□ 1.83
LTN1O94822 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LTN1O94822 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LTN1O94822 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
LTN1O94822 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LTN1O94822 RCC2P6-201ENST00000526625 1557 ntBASIC26.5■■□□□ 1.83
LTN1O94822 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC26.5■■□□□ 1.83
LTN1O94822 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LTN1O94822 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC26.5■■□□□ 1.83
LTN1O94822 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LTN1O94822 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
LTN1O94822 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LTN1O94822 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC26.49■■□□□ 1.83
LTN1O94822 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LTN1O94822 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LTN1O94822 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
LTN1O94822 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
LTN1O94822 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
LTN1O94822 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC26.49■■□□□ 1.83
LTN1O94822 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
LTN1O94822 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LTN1O94822 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms