Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CDKL5O76039 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CDKL5O76039 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CDKL5O76039 AP001271.2-201ENST00000624018 1556 ntBASIC23.14■■□□□ 1.29
CDKL5O76039 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CDKL5O76039 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.13■■□□□ 1.29
CDKL5O76039 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.13■■□□□ 1.29
CDKL5O76039 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 PHGDH-210ENST00000641115 1638 ntBASIC23.13■■□□□ 1.29
CDKL5O76039 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.13■■□□□ 1.29
CDKL5O76039 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.13■■□□□ 1.29
CDKL5O76039 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.13■■□□□ 1.29
CDKL5O76039 AL138781.1-201ENST00000566567 1274 ntBASIC23.13■■□□□ 1.29
CDKL5O76039 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.13■■□□□ 1.29
CDKL5O76039 AC005829.2-201ENST00000571422 1056 ntBASIC23.13■■□□□ 1.29
CDKL5O76039 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.13■■□□□ 1.29
CDKL5O76039 AC104771.1-201ENST00000603335 964 ntBASIC23.13■■□□□ 1.29
CDKL5O76039 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.13■■□□□ 1.29
CDKL5O76039 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.13■■□□□ 1.29
CDKL5O76039 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.13■■□□□ 1.29
CDKL5O76039 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.13■■□□□ 1.29
CDKL5O76039 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
CDKL5O76039 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
CDKL5O76039 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKL5O76039 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CDKL5O76039 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CDKL5O76039 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.12■■□□□ 1.29
CDKL5O76039 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.12■■□□□ 1.29
CDKL5O76039 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
CDKL5O76039 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CDKL5O76039 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.12■■□□□ 1.29
CDKL5O76039 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.12■■□□□ 1.29
CDKL5O76039 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.12■■□□□ 1.29
CDKL5O76039 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDKL5O76039 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.11■■□□□ 1.29
CDKL5O76039 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDKL5O76039 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDKL5O76039 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDKL5O76039 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDKL5O76039 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDKL5O76039 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDKL5O76039 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
CDKL5O76039 AC133041.1-202ENST00000642053 222 ntBASIC23.11■■□□□ 1.29
CDKL5O76039 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.11■■□□□ 1.29
CDKL5O76039 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDKL5O76039 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDKL5O76039 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.11■■□□□ 1.29
CDKL5O76039 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDKL5O76039 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.11■■□□□ 1.29
CDKL5O76039 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDKL5O76039 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDKL5O76039 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDKL5O76039 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.1■■□□□ 1.29
CDKL5O76039 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CDKL5O76039 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.1■■□□□ 1.29
CDKL5O76039 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CDKL5O76039 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDKL5O76039 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDKL5O76039 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.1■■□□□ 1.29
CDKL5O76039 AC142086.2-201ENST00000569753 217 ntBASIC23.1■■□□□ 1.29
CDKL5O76039 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.1■■□□□ 1.29
CDKL5O76039 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
CDKL5O76039 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDKL5O76039 HLA-B-256ENST00000639848 1089 ntBASIC23.1■■□□□ 1.29
CDKL5O76039 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDKL5O76039 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDKL5O76039 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CDKL5O76039 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDKL5O76039 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.1■■□□□ 1.29
CDKL5O76039 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDKL5O76039 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDKL5O76039 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CDKL5O76039 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CDKL5O76039 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.09■■□□□ 1.29
CDKL5O76039 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms