Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
USP12O75317 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
USP12O75317 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.31■□□□□ 0.84
USP12O75317 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.31■□□□□ 0.84
USP12O75317 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.31■□□□□ 0.84
USP12O75317 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP12O75317 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.31■□□□□ 0.84
USP12O75317 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.31■□□□□ 0.84
USP12O75317 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP12O75317 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP12O75317 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.31■□□□□ 0.84
USP12O75317 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP12O75317 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.31■□□□□ 0.84
USP12O75317 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP12O75317 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP12O75317 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP12O75317 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.31■□□□□ 0.84
USP12O75317 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP12O75317 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP12O75317 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.3■□□□□ 0.84
USP12O75317 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.3■□□□□ 0.84
USP12O75317 DUSP5P2-201ENST00000426873 1033 ntBASIC20.3■□□□□ 0.84
USP12O75317 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.3■□□□□ 0.84
USP12O75317 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
USP12O75317 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.3■□□□□ 0.84
USP12O75317 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.3■□□□□ 0.84
USP12O75317 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP12O75317 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.3■□□□□ 0.84
USP12O75317 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.3■□□□□ 0.84
USP12O75317 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
USP12O75317 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
USP12O75317 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.29■□□□□ 0.84
USP12O75317 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.29■□□□□ 0.84
USP12O75317 AC097658.1-201ENST00000475555 843 ntBASIC20.29■□□□□ 0.84
USP12O75317 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.29■□□□□ 0.84
USP12O75317 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.29■□□□□ 0.84
USP12O75317 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.29■□□□□ 0.84
USP12O75317 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.29■□□□□ 0.84
USP12O75317 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.29■□□□□ 0.84
USP12O75317 AP006294.2-201ENST00000641667 209 ntBASIC20.29■□□□□ 0.84
USP12O75317 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
USP12O75317 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 AC125437.2-201ENST00000625180 2167 ntBASIC20.29■□□□□ 0.84
USP12O75317 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP12O75317 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP12O75317 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.28■□□□□ 0.84
USP12O75317 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP12O75317 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP12O75317 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.28■□□□□ 0.84
USP12O75317 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP12O75317 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.28■□□□□ 0.84
USP12O75317 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP12O75317 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.28■□□□□ 0.84
USP12O75317 ESRRAP1-201ENST00000400596 1257 ntBASIC20.28■□□□□ 0.84
USP12O75317 LSM12P1-201ENST00000411836 588 ntBASIC20.28■□□□□ 0.84
USP12O75317 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.28■□□□□ 0.84
USP12O75317 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.28■□□□□ 0.84
USP12O75317 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.28■□□□□ 0.84
USP12O75317 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.28■□□□□ 0.84
USP12O75317 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP12O75317 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP12O75317 AC083880.1-201ENST00000608266 535 ntBASIC20.28■□□□□ 0.84
USP12O75317 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP12O75317 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
USP12O75317 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP12O75317 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP12O75317 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
USP12O75317 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.28■□□□□ 0.84
USP12O75317 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP12O75317 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.27■□□□□ 0.84
USP12O75317 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP12O75317 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP12O75317 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.27■□□□□ 0.84
USP12O75317 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.27■□□□□ 0.84
USP12O75317 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP12O75317 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP12O75317 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
USP12O75317 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
USP12O75317 AC098590.1-201ENST00000468126 897 ntBASIC20.27■□□□□ 0.84
USP12O75317 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms