Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AL691432.2-201ENST00000607222 2038 ntBASIC20.22■□□□□ 0.83
KDELR3O43731 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.22■□□□□ 0.83
KDELR3O43731 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KDELR3O43731 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KDELR3O43731 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.22■□□□□ 0.83
KDELR3O43731 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDELR3O43731 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.22■□□□□ 0.83
KDELR3O43731 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.22■□□□□ 0.83
KDELR3O43731 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.22■□□□□ 0.83
KDELR3O43731 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.22■□□□□ 0.83
KDELR3O43731 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.22■□□□□ 0.83
KDELR3O43731 AC018553.1-201ENST00000616682 1458 ntBASIC20.22■□□□□ 0.83
KDELR3O43731 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
KDELR3O43731 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KDELR3O43731 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KDELR3O43731 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KDELR3O43731 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.21■□□□□ 0.83
KDELR3O43731 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.21■□□□□ 0.83
KDELR3O43731 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.21■□□□□ 0.83
KDELR3O43731 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.21■□□□□ 0.83
KDELR3O43731 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.21■□□□□ 0.83
KDELR3O43731 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.21■□□□□ 0.83
KDELR3O43731 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDELR3O43731 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
KDELR3O43731 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.2■□□□□ 0.82
KDELR3O43731 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDELR3O43731 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDELR3O43731 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDELR3O43731 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDELR3O43731 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KDELR3O43731 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.2■□□□□ 0.82
KDELR3O43731 PRKY-204ENST00000533551 1019 ntBASIC20.2■□□□□ 0.82
KDELR3O43731 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDELR3O43731 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.2■□□□□ 0.82
KDELR3O43731 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.2■□□□□ 0.82
KDELR3O43731 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDELR3O43731 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KDELR3O43731 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.2■□□□□ 0.82
KDELR3O43731 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDELR3O43731 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KDELR3O43731 TFP1-202ENST00000475455 1573 ntBASIC20.2■□□□□ 0.82
KDELR3O43731 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.2■□□□□ 0.82
KDELR3O43731 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.2■□□□□ 0.82
KDELR3O43731 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.2■□□□□ 0.82
KDELR3O43731 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KDELR3O43731 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.2■□□□□ 0.82
KDELR3O43731 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KDELR3O43731 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KDELR3O43731 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KDELR3O43731 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KDELR3O43731 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
KDELR3O43731 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.19■□□□□ 0.82
KDELR3O43731 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
KDELR3O43731 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KDELR3O43731 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.19■□□□□ 0.82
KDELR3O43731 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.19■□□□□ 0.82
KDELR3O43731 AL023875.1-201ENST00000640777 796 ntBASIC20.19■□□□□ 0.82
KDELR3O43731 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KDELR3O43731 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.19■□□□□ 0.82
KDELR3O43731 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDELR3O43731 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
KDELR3O43731 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
KDELR3O43731 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.19■□□□□ 0.82
KDELR3O43731 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDELR3O43731 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
KDELR3O43731 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.18■□□□□ 0.82
KDELR3O43731 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
KDELR3O43731 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.18■□□□□ 0.82
KDELR3O43731 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.18■□□□□ 0.82
KDELR3O43731 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 TCF3P1-201ENST00000423021 1937 ntBASIC20.18■□□□□ 0.82
KDELR3O43731 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 AC098590.1-201ENST00000468126 897 ntBASIC20.18■□□□□ 0.82
KDELR3O43731 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.18■□□□□ 0.82
KDELR3O43731 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
KDELR3O43731 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
KDELR3O43731 RPPH1-201ENST00000516869 333 ntBASIC20.18■□□□□ 0.82
KDELR3O43731 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.18■□□□□ 0.82
KDELR3O43731 C1QBPP2-201ENST00000528754 825 ntBASIC20.18■□□□□ 0.82
KDELR3O43731 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.18■□□□□ 0.82
KDELR3O43731 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms