Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RIPK2O43353 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RIPK2O43353 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RIPK2O43353 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIPK2O43353 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.21■□□□□ 0.83
RIPK2O43353 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.2■□□□□ 0.83
RIPK2O43353 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.2■□□□□ 0.82
RIPK2O43353 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
RIPK2O43353 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 AC027612.3-201ENST00000413684 1047 ntBASIC20.2■□□□□ 0.82
RIPK2O43353 AC097381.1-201ENST00000429019 1296 ntBASIC20.2■□□□□ 0.82
RIPK2O43353 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.2■□□□□ 0.82
RIPK2O43353 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RIPK2O43353 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
RIPK2O43353 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RIPK2O43353 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIPK2O43353 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK2O43353 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK2O43353 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RIPK2O43353 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.19■□□□□ 0.82
RIPK2O43353 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.19■□□□□ 0.82
RIPK2O43353 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.19■□□□□ 0.82
RIPK2O43353 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK2O43353 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK2O43353 AC019069.1-201ENST00000610008 1333 ntBASIC20.19■□□□□ 0.82
RIPK2O43353 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK2O43353 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK2O43353 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RIPK2O43353 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.19■□□□□ 0.82
RIPK2O43353 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK2O43353 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIPK2O43353 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK2O43353 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK2O43353 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RIPK2O43353 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK2O43353 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.18■□□□□ 0.82
RIPK2O43353 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RIPK2O43353 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.18■□□□□ 0.82
RIPK2O43353 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIPK2O43353 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RIPK2O43353 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK2O43353 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK2O43353 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK2O43353 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK2O43353 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK2O43353 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.17■□□□□ 0.82
RIPK2O43353 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK2O43353 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.17■□□□□ 0.82
RIPK2O43353 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.17■□□□□ 0.82
RIPK2O43353 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.17■□□□□ 0.82
RIPK2O43353 AL138781.2-201ENST00000617896 1843 ntBASIC20.17■□□□□ 0.82
RIPK2O43353 LINC02228-203ENST00000641970 1355 ntBASIC20.17■□□□□ 0.82
RIPK2O43353 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK2O43353 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RIPK2O43353 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK2O43353 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIPK2O43353 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RIPK2O43353 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIPK2O43353 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RIPK2O43353 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIPK2O43353 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIPK2O43353 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RIPK2O43353 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.16■□□□□ 0.82
RIPK2O43353 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIPK2O43353 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.16■□□□□ 0.82
RIPK2O43353 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RIPK2O43353 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms