Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.75■□□□□ 0.59
RRP8O43159 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RRP8O43159 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.75■□□□□ 0.59
RRP8O43159 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
RRP8O43159 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.75■□□□□ 0.59
RRP8O43159 AP000550.4-202ENST00000639755 178 ntBASIC18.75■□□□□ 0.59
RRP8O43159 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.75■□□□□ 0.59
RRP8O43159 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RRP8O43159 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RRP8O43159 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RRP8O43159 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RRP8O43159 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RRP8O43159 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RRP8O43159 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RRP8O43159 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RRP8O43159 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.74■□□□□ 0.59
RRP8O43159 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RRP8O43159 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RRP8O43159 AC026396.1-201ENST00000419388 421 ntBASIC18.74■□□□□ 0.59
RRP8O43159 AC092647.4-201ENST00000457211 535 ntBASIC18.74■□□□□ 0.59
RRP8O43159 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.74■□□□□ 0.59
RRP8O43159 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RRP8O43159 DGCR10-201ENST00000609839 495 ntBASIC18.74■□□□□ 0.59
RRP8O43159 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RRP8O43159 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RRP8O43159 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RRP8O43159 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RRP8O43159 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RRP8O43159 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RRP8O43159 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RRP8O43159 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RRP8O43159 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RRP8O43159 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.73■□□□□ 0.59
RRP8O43159 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.73■□□□□ 0.59
RRP8O43159 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.73■□□□□ 0.59
RRP8O43159 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.73■□□□□ 0.59
RRP8O43159 AC009947.2-201ENST00000444014 672 ntBASIC18.73■□□□□ 0.59
RRP8O43159 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.73■□□□□ 0.59
RRP8O43159 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.73■□□□□ 0.59
RRP8O43159 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.73■□□□□ 0.59
RRP8O43159 AC026271.3-201ENST00000571884 352 ntBASIC18.73■□□□□ 0.59
RRP8O43159 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RRP8O43159 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RRP8O43159 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RRP8O43159 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.73■□□□□ 0.59
RRP8O43159 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.73■□□□□ 0.59
RRP8O43159 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.73■□□□□ 0.59
RRP8O43159 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RRP8O43159 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
RRP8O43159 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.72■□□□□ 0.59
RRP8O43159 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RRP8O43159 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RRP8O43159 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RRP8O43159 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RRP8O43159 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.72■□□□□ 0.59
RRP8O43159 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RRP8O43159 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RRP8O43159 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RRP8O43159 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.72■□□□□ 0.59
RRP8O43159 HLA-G-202ENST00000376815 851 ntBASIC18.72■□□□□ 0.59
RRP8O43159 HLA-G-203ENST00000376818 1127 ntBASIC18.72■□□□□ 0.59
RRP8O43159 RNF152P1-201ENST00000397754 604 ntBASIC18.72■□□□□ 0.59
RRP8O43159 CRYGFP-201ENST00000418459 633 ntBASIC18.72■□□□□ 0.59
RRP8O43159 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RRP8O43159 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
RRP8O43159 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.72■□□□□ 0.59
RRP8O43159 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.72■□□□□ 0.59
RRP8O43159 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.72■□□□□ 0.59
RRP8O43159 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.72■□□□□ 0.59
RRP8O43159 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.72■□□□□ 0.59
RRP8O43159 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RRP8O43159 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RRP8O43159 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.72■□□□□ 0.59
RRP8O43159 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RRP8O43159 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RRP8O43159 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.72■□□□□ 0.59
RRP8O43159 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RRP8O43159 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RRP8O43159 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.71■□□□□ 0.59
RRP8O43159 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.71■□□□□ 0.59
RRP8O43159 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RRP8O43159 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RRP8O43159 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.71■□□□□ 0.59
RRP8O43159 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RRP8O43159 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RRP8O43159 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.71■□□□□ 0.59
RRP8O43159 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RRP8O43159 FAM8A6P-201ENST00000407496 1135 ntBASIC18.71■□□□□ 0.59
RRP8O43159 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.71■□□□□ 0.59
RRP8O43159 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.71■□□□□ 0.59
RRP8O43159 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.71■□□□□ 0.59
RRP8O43159 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RRP8O43159 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.71■□□□□ 0.59
RRP8O43159 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RRP8O43159 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RRP8O43159 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.71■□□□□ 0.59
RRP8O43159 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.71■□□□□ 0.59
RRP8O43159 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RRP8O43159 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.71■□□□□ 0.59
RRP8O43159 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms