Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FOXN1O15353 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.81■■□□□ 1.4
FOXN1O15353 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
FOXN1O15353 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FOXN1O15353 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.8■■□□□ 1.4
FOXN1O15353 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.8■■□□□ 1.4
FOXN1O15353 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXN1O15353 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXN1O15353 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.8■■□□□ 1.4
FOXN1O15353 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FOXN1O15353 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXN1O15353 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.8■■□□□ 1.4
FOXN1O15353 PVRIG2P-201ENST00000435460 978 ntBASIC23.8■■□□□ 1.4
FOXN1O15353 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FOXN1O15353 AL121906.2-201ENST00000621597 723 ntBASIC23.8■■□□□ 1.4
FOXN1O15353 AL691432.3-201ENST00000621860 400 ntBASIC23.8■■□□□ 1.4
FOXN1O15353 AC093458.2-201ENST00000623150 629 ntBASIC23.8■■□□□ 1.4
FOXN1O15353 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
FOXN1O15353 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXN1O15353 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXN1O15353 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOXN1O15353 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.8■■□□□ 1.4
FOXN1O15353 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.79■■□□□ 1.4
FOXN1O15353 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
FOXN1O15353 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
FOXN1O15353 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
FOXN1O15353 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.79■■□□□ 1.4
FOXN1O15353 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 AC245052.3-201ENST00000450182 901 ntBASIC23.79■■□□□ 1.4
FOXN1O15353 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.79■■□□□ 1.4
FOXN1O15353 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.79■■□□□ 1.4
FOXN1O15353 AC023511.2-201ENST00000618803 211 ntBASIC23.79■■□□□ 1.4
FOXN1O15353 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOXN1O15353 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
FOXN1O15353 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOXN1O15353 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.78■■□□□ 1.4
FOXN1O15353 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOXN1O15353 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOXN1O15353 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.78■■□□□ 1.4
FOXN1O15353 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.78■■□□□ 1.4
FOXN1O15353 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.78■■□□□ 1.4
FOXN1O15353 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.78■■□□□ 1.4
FOXN1O15353 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.78■■□□□ 1.4
FOXN1O15353 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.78■■□□□ 1.4
FOXN1O15353 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
FOXN1O15353 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
FOXN1O15353 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
FOXN1O15353 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.78■■□□□ 1.4
FOXN1O15353 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOXN1O15353 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.78■■□□□ 1.4
FOXN1O15353 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOXN1O15353 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOXN1O15353 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOXN1O15353 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FOXN1O15353 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOXN1O15353 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.77■■□□□ 1.4
FOXN1O15353 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOXN1O15353 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.77■■□□□ 1.4
FOXN1O15353 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
FOXN1O15353 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.77■■□□□ 1.4
FOXN1O15353 AC246785.2-201ENST00000432512 513 ntBASIC23.77■■□□□ 1.4
FOXN1O15353 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
FOXN1O15353 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.77■■□□□ 1.4
FOXN1O15353 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC23.77■■□□□ 1.4
FOXN1O15353 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.77■■□□□ 1.4
FOXN1O15353 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.77■■□□□ 1.4
FOXN1O15353 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.77■■□□□ 1.4
FOXN1O15353 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.77■■□□□ 1.4
FOXN1O15353 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FOXN1O15353 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOXN1O15353 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOXN1O15353 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FOXN1O15353 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FOXN1O15353 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.77■■□□□ 1.4
FOXN1O15353 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
FOXN1O15353 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOXN1O15353 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.76■■□□□ 1.39
FOXN1O15353 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOXN1O15353 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
FOXN1O15353 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.76■■□□□ 1.39
FOXN1O15353 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.76■■□□□ 1.39
FOXN1O15353 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOXN1O15353 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOXN1O15353 BX664615.1-201ENST00000443558 458 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms