Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASQ2O14958 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASQ2O14958 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.9■□□□□ 0.62
CASQ2O14958 AP005435.1-201ENST00000529293 1178 ntBASIC18.9■□□□□ 0.62
CASQ2O14958 NTF6A-201ENST00000591175 560 ntBASIC18.9■□□□□ 0.62
CASQ2O14958 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.9■□□□□ 0.62
CASQ2O14958 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.9■□□□□ 0.62
CASQ2O14958 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.9■□□□□ 0.62
CASQ2O14958 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASQ2O14958 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASQ2O14958 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASQ2O14958 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASQ2O14958 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.9■□□□□ 0.62
CASQ2O14958 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASQ2O14958 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASQ2O14958 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CASQ2O14958 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CASQ2O14958 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CASQ2O14958 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CASQ2O14958 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CASQ2O14958 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 YBX1P4-201ENST00000392794 808 ntBASIC18.89■□□□□ 0.61
CASQ2O14958 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.89■□□□□ 0.61
CASQ2O14958 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.89■□□□□ 0.61
CASQ2O14958 AC099791.2-201ENST00000605725 427 ntBASIC18.89■□□□□ 0.61
CASQ2O14958 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.89■□□□□ 0.61
CASQ2O14958 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.89■□□□□ 0.61
CASQ2O14958 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 AL032819.2-201ENST00000624543 2162 ntBASIC18.89■□□□□ 0.61
CASQ2O14958 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.89■□□□□ 0.61
CASQ2O14958 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASQ2O14958 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CASQ2O14958 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.88■□□□□ 0.61
CASQ2O14958 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASQ2O14958 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CASQ2O14958 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CASQ2O14958 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.88■□□□□ 0.61
CASQ2O14958 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CASQ2O14958 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASQ2O14958 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASQ2O14958 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASQ2O14958 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASQ2O14958 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CASQ2O14958 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CASQ2O14958 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.87■□□□□ 0.61
CASQ2O14958 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CASQ2O14958 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.87■□□□□ 0.61
CASQ2O14958 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASQ2O14958 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASQ2O14958 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CASQ2O14958 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASQ2O14958 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASQ2O14958 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASQ2O14958 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.86■□□□□ 0.61
CASQ2O14958 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.86■□□□□ 0.61
CASQ2O14958 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.86■□□□□ 0.61
CASQ2O14958 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASQ2O14958 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASQ2O14958 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASQ2O14958 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CASQ2O14958 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.86■□□□□ 0.61
CASQ2O14958 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASQ2O14958 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASQ2O14958 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASQ2O14958 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.86■□□□□ 0.61
CASQ2O14958 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASQ2O14958 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CASQ2O14958 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.86■□□□□ 0.61
CASQ2O14958 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.86■□□□□ 0.61
CASQ2O14958 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms