Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.56■□□□□ 0.56
AP3D1O14617 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
AP3D1O14617 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 AC087633.2-202ENST00000565166 1439 ntBASIC18.56■□□□□ 0.56
AP3D1O14617 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP3D1O14617 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
AP3D1O14617 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
AP3D1O14617 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
AP3D1O14617 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP3D1O14617 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.55■□□□□ 0.56
AP3D1O14617 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3D1O14617 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
AP3D1O14617 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
AP3D1O14617 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3D1O14617 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3D1O14617 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
AP3D1O14617 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.55■□□□□ 0.56
AP3D1O14617 AC007322.1-201ENST00000426983 750 ntBASIC18.55■□□□□ 0.56
AP3D1O14617 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.55■□□□□ 0.56
AP3D1O14617 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.55■□□□□ 0.56
AP3D1O14617 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.55■□□□□ 0.56
AP3D1O14617 AL356652.1-201ENST00000615962 565 ntBASIC18.55■□□□□ 0.56
AP3D1O14617 AC231657.2-201ENST00000624556 255 ntBASIC18.55■□□□□ 0.56
AP3D1O14617 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP3D1O14617 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP3D1O14617 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
AP3D1O14617 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
AP3D1O14617 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
AP3D1O14617 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP3D1O14617 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP3D1O14617 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.54■□□□□ 0.56
AP3D1O14617 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.54■□□□□ 0.56
AP3D1O14617 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
AP3D1O14617 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.54■□□□□ 0.56
AP3D1O14617 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.54■□□□□ 0.56
AP3D1O14617 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
AP3D1O14617 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
AP3D1O14617 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
AP3D1O14617 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.54■□□□□ 0.56
AP3D1O14617 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.54■□□□□ 0.56
AP3D1O14617 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.54■□□□□ 0.56
AP3D1O14617 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.54■□□□□ 0.56
AP3D1O14617 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.54■□□□□ 0.56
AP3D1O14617 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.54■□□□□ 0.56
AP3D1O14617 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP3D1O14617 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.53■□□□□ 0.56
AP3D1O14617 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
AP3D1O14617 AC080038.1-201ENST00000611274 1154 ntBASIC18.53■□□□□ 0.56
AP3D1O14617 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.53■□□□□ 0.56
AP3D1O14617 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.53■□□□□ 0.56
AP3D1O14617 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
AP3D1O14617 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP3D1O14617 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.52■□□□□ 0.56
AP3D1O14617 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3D1O14617 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3D1O14617 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3D1O14617 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.52■□□□□ 0.56
AP3D1O14617 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3D1O14617 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.52■□□□□ 0.56
AP3D1O14617 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
AP3D1O14617 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3D1O14617 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.52■□□□□ 0.56
AP3D1O14617 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
AP3D1O14617 AL137784.2-201ENST00000607332 1000 ntBASIC18.52■□□□□ 0.56
AP3D1O14617 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.52■□□□□ 0.56
AP3D1O14617 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.52■□□□□ 0.56
AP3D1O14617 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
AP3D1O14617 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP3D1O14617 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP3D1O14617 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.52■□□□□ 0.55
AP3D1O14617 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms