Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA1AO00555 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CACNA1AO00555 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNA1AO00555 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNA1AO00555 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1AO00555 IL9RP2-201ENST00000423948 1312 ntBASIC18.9■□□□□ 0.62
CACNA1AO00555 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA1AO00555 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1AO00555 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CACNA1AO00555 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1AO00555 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.9■□□□□ 0.62
CACNA1AO00555 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA1AO00555 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.9■□□□□ 0.62
CACNA1AO00555 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1AO00555 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA1AO00555 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1AO00555 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA1AO00555 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1AO00555 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNA1AO00555 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA1AO00555 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNA1AO00555 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.9■□□□□ 0.62
CACNA1AO00555 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CACNA1AO00555 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CACNA1AO00555 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CACNA1AO00555 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CACNA1AO00555 BX119927.1-201ENST00000636596 1552 ntBASIC18.89■□□□□ 0.62
CACNA1AO00555 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CACNA1AO00555 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1AO00555 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1AO00555 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1AO00555 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1AO00555 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1AO00555 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1AO00555 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1AO00555 AC004980.1-204ENST00000429707 299 ntBASIC18.89■□□□□ 0.61
CACNA1AO00555 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.89■□□□□ 0.61
CACNA1AO00555 KRT18P31-201ENST00000506277 1292 ntBASIC18.89■□□□□ 0.61
CACNA1AO00555 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA1AO00555 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA1AO00555 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
CACNA1AO00555 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNA1AO00555 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNA1AO00555 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.89■□□□□ 0.61
CACNA1AO00555 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.89■□□□□ 0.61
CACNA1AO00555 AL645929.1-201ENST00000420084 975 ntBASIC18.89■□□□□ 0.61
CACNA1AO00555 AC005104.2-201ENST00000427818 678 ntBASIC18.89■□□□□ 0.61
CACNA1AO00555 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CACNA1AO00555 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CACNA1AO00555 AC112907.2-201ENST00000448639 330 ntBASIC18.89■□□□□ 0.61
CACNA1AO00555 KRT16P4-201ENST00000453883 522 ntBASIC18.89■□□□□ 0.61
CACNA1AO00555 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.89■□□□□ 0.61
CACNA1AO00555 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.89■□□□□ 0.61
CACNA1AO00555 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA1AO00555 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CACNA1AO00555 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CACNA1AO00555 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA1AO00555 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA1AO00555 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.88■□□□□ 0.61
CACNA1AO00555 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA1AO00555 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CACNA1AO00555 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNA1AO00555 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNA1AO00555 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA1AO00555 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNA1AO00555 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CACNA1AO00555 SPDYE15P-201ENST00000424157 909 ntBASIC18.88■□□□□ 0.61
CACNA1AO00555 AC008040.2-201ENST00000461049 708 ntBASIC18.88■□□□□ 0.61
CACNA1AO00555 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CACNA1AO00555 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
CACNA1AO00555 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.87■□□□□ 0.61
CACNA1AO00555 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CACNA1AO00555 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CACNA1AO00555 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.87■□□□□ 0.61
CACNA1AO00555 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.87■□□□□ 0.61
CACNA1AO00555 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.87■□□□□ 0.61
CACNA1AO00555 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA1AO00555 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.87■□□□□ 0.61
CACNA1AO00555 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA1AO00555 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CACNA1AO00555 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1AO00555 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA1AO00555 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1AO00555 HBZP1-201ENST00000354915 429 ntBASIC18.86■□□□□ 0.61
CACNA1AO00555 HLA-G-203ENST00000376818 1127 ntBASIC18.86■□□□□ 0.61
CACNA1AO00555 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA1AO00555 LINC01311-201ENST00000565162 1445 ntBASIC18.86■□□□□ 0.61
CACNA1AO00555 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms