Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.98■□□□□ 0.63
RTCAO00442 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTCAO00442 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTCAO00442 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTCAO00442 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTCAO00442 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RTCAO00442 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.98■□□□□ 0.63
RTCAO00442 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.98■□□□□ 0.63
RTCAO00442 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTCAO00442 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RTCAO00442 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTCAO00442 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTCAO00442 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RTCAO00442 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RTCAO00442 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RTCAO00442 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.97■□□□□ 0.63
RTCAO00442 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.97■□□□□ 0.63
RTCAO00442 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.97■□□□□ 0.63
RTCAO00442 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.97■□□□□ 0.63
RTCAO00442 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 AC073210.2-201ENST00000430369 194 ntBASIC18.97■□□□□ 0.63
RTCAO00442 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.97■□□□□ 0.63
RTCAO00442 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
RTCAO00442 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.97■□□□□ 0.63
RTCAO00442 AC006557.6-201ENST00000623071 864 ntBASIC18.97■□□□□ 0.63
RTCAO00442 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
RTCAO00442 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RTCAO00442 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RTCAO00442 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RTCAO00442 KRT16P6-202ENST00000425692 1426 ntBASIC18.97■□□□□ 0.63
RTCAO00442 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.97■□□□□ 0.63
RTCAO00442 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RTCAO00442 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.97■□□□□ 0.63
RTCAO00442 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTCAO00442 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.96■□□□□ 0.63
RTCAO00442 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
RTCAO00442 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTCAO00442 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTCAO00442 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RTCAO00442 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.96■□□□□ 0.63
RTCAO00442 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.96■□□□□ 0.63
RTCAO00442 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.96■□□□□ 0.63
RTCAO00442 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTCAO00442 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTCAO00442 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.96■□□□□ 0.63
RTCAO00442 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.96■□□□□ 0.63
RTCAO00442 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTCAO00442 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTCAO00442 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.96■□□□□ 0.63
RTCAO00442 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTCAO00442 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTCAO00442 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RTCAO00442 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.95■□□□□ 0.62
RTCAO00442 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.95■□□□□ 0.62
RTCAO00442 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.95■□□□□ 0.62
RTCAO00442 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.95■□□□□ 0.62
RTCAO00442 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.95■□□□□ 0.62
RTCAO00442 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTCAO00442 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
RTCAO00442 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 AC092368.3-202ENST00000574180 1591 ntBASIC18.94■□□□□ 0.62
RTCAO00442 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RTCAO00442 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.94■□□□□ 0.62
RTCAO00442 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RTCAO00442 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.94■□□□□ 0.62
RTCAO00442 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.94■□□□□ 0.62
RTCAO00442 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTCAO00442 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.94■□□□□ 0.62
RTCAO00442 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.94■□□□□ 0.62
RTCAO00442 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms