Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.97■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 AC007375.3-201ENST00000600936 2314 ntBASIC19.97■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 MIR4785-201ENST00000585005 73 ntBASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 AC113410.3-201ENST00000623366 203 ntBASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
C1QTNF3-AMACRE9PGA6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 TSPY7P-201ENST00000431358 1114 ntBASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AC116351.2-201ENST00000606540 1585 ntBASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AP006587.1-201ENST00000534129 1502 ntBASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 SMG8-203ENST00000578922 2178 ntBASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AF186192.3-201ENST00000583427 947 ntBASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 PHGDH-210ENST00000641115 1638 ntBASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.92■□□□□ 0.78
C1QTNF3-AMACRE9PGA6 AP002982.1-201ENST00000492365 877 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms