Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.57■□□□□ 0.88
SRRM3A6NNA2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.56■□□□□ 0.88
SRRM3A6NNA2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM3A6NNA2 NEFHP1-201ENST00000412845 2629 ntBASIC20.56■□□□□ 0.88
SRRM3A6NNA2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM3A6NNA2 AC092720.2-201ENST00000602388 1665 ntBASIC20.54■□□□□ 0.88
SRRM3A6NNA2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.54■□□□□ 0.88
SRRM3A6NNA2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM3A6NNA2 MKRN4P-201ENST00000444706 1521 ntBASIC20.53■□□□□ 0.88
SRRM3A6NNA2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 KRT18P21-201ENST00000515767 1272 ntBASIC20.52■□□□□ 0.88
SRRM3A6NNA2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SRRM3A6NNA2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms