Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 C2orf69P4-201ENST00000565394 541 ntBASIC18.17■□□□□ 0.5
ZC3H12DA2A288 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.17■□□□□ 0.5
ZC3H12DA2A288 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
ZC3H12DA2A288 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.15■□□□□ 0.5
ZC3H12DA2A288 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZC3H12DA2A288 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.14■□□□□ 0.5
ZC3H12DA2A288 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ZC3H12DA2A288 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
ZC3H12DA2A288 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.14■□□□□ 0.5
ZC3H12DA2A288 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ZC3H12DA2A288 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
ZC3H12DA2A288 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 SLC29A4P1-201ENST00000398760 971 ntBASIC18.14■□□□□ 0.49
ZC3H12DA2A288 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZC3H12DA2A288 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
ZC3H12DA2A288 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ZC3H12DA2A288 BX119927.1-201ENST00000636596 1552 ntBASIC18.13■□□□□ 0.49
ZC3H12DA2A288 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms