Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 IKBKGP1-201ENST00000612193 1073 ntBASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-4A0A1B0GX49 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 MIR663A-201ENST00000385250 93 ntBASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-4A0A1B0GX49 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-4A0A1B0GX49 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.02□□□□□ -0.16
TRBV6-4A0A1B0GX49 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV6-4A0A1B0GX49 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-4A0A1B0GX49 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-4A0A1B0GX49 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRBV6-4A0A1B0GX49 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-4A0A1B0GX49 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-4A0A1B0GX49 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-4A0A1B0GX49 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV6-4A0A1B0GX49 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV6-4A0A1B0GX49 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV6-4A0A1B0GX49 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms