Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV10A0A0B4J240 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 AC124283.5-201ENST00000624661 1809 ntBASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 AC073912.3-201ENST00000624414 853 ntBASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV10A0A0B4J240 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 KRT16P6-202ENST00000425692 1426 ntBASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV10A0A0B4J240 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms