Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 RARRES2P6-201ENST00000567333 442 ntBASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.1■□□□□ 0.01
TRAV8-2A0A0B4J237 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-2A0A0B4J237 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV8-2A0A0B4J237 HCG11-201ENST00000411553 5696 ntBASIC15.08■□□□□ 0.01
TRAV8-2A0A0B4J237 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV8-2A0A0B4J237 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV8-2A0A0B4J237 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
TRAV8-2A0A0B4J237 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 CYP2T1P-201ENST00000432607 1285 ntBASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 AC105020.6-201ENST00000621523 1217 ntBASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
TRAV8-2A0A0B4J237 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-2A0A0B4J237 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms