Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGKV2-28A0A075B6P5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV2-28A0A075B6P5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 AP004607.4-201ENST00000530158 1459 ntBASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 EDA-201ENST00000338901 1233 ntBASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 AF213884.3-201ENST00000563833 479 ntBASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 AL355001.2-201ENST00000620617 1191 ntBASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 MIR2861-201ENST00000636310 90 ntBASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IGKV2-28A0A075B6P5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 AL138781.2-201ENST00000617896 1843 ntBASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 AC120498.9-201ENST00000339021 3867 ntBASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 RASA4CP-201ENST00000424092 1398 ntBASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 MIR572-201ENST00000384983 95 ntBASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.11□□□□□ -0.31
IGKV2-28A0A075B6P5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms