Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SNORA11E-201ENST00000408778 128 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SKP117-201ENST00000410175 264 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AL662791.3-201ENST00000413771 776 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 PSMC1P2-201ENST00000423961 1204 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC009362.1-201ENST00000427253 406 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 FECHP1-201ENST00000431896 1214 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 CDK7P1-201ENST00000434574 693 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC009518.3-201ENST00000438972 253 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC005517.1-201ENST00000452091 489 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 RPS4XP19-201ENST00000460237 736 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL456P-201ENST00000469290 295 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SL259P-201ENST00000478499 253 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 IGLC4-201ENST00000517690 248 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 EIF4A3P1-201ENST00000578499 647 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 MIR4420-201ENST00000583944 77 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC011447.2-201ENST00000592921 283 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 SIGLEC31P-201ENST00000594237 551 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC008626.2-201ENST00000624425 248 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC073263.3-201ENST00000624449 858 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 MIR665-201ENST00000635949 72 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 KYNUP2-201ENST00000582280 1329 ntBASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.14□□□□□ -1.59
HLA-DRB4X5D2U9 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 MAPK10-357ENST00000641831 2858 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC034229.2-201ENST00000566945 2508 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 MIR541-201ENST00000401360 84 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 RNA5SP251-201ENST00000410614 137 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AL713922.1-201ENST00000416477 747 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 FDPSP6-201ENST00000425091 512 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 DNAJC19P5-201ENST00000443295 316 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 TVP23CP1-201ENST00000450317 639 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 MED28P7-201ENST00000456611 530 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC126615.1-201ENST00000470084 630 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AF305872.1-201ENST00000485217 471 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 RPL21P42-201ENST00000488408 464 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 AC021220.1-201ENST00000507445 630 ntBASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DRB4X5D2U9 RN7SKP11-201ENST00000517018 287 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms