Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 XRCC6P4-201ENST00000518193 2067 ntBASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 LRRC37A4P-202ENST00000581296 5372 ntBASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 SPECC1-205ENST00000395529 4971 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AC016397.1-201ENST00000412463 242 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AC127526.2-201ENST00000426436 775 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 VN1R110P-201ENST00000438988 971 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 HIGD1AP16-201ENST00000450986 258 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 RN7SL705P-201ENST00000481678 294 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AC139272.1-201ENST00000505516 640 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AF230666.2-201ENST00000602328 725 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 PACRG-210ENST00000611387 279 ntTSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AC007204.2-201ENST00000615022 616 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 OR51A10P-201ENST00000307165 937 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 RNA5SP375-201ENST00000362975 119 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AL355032.1-201ENST00000472981 438 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 HNRNPCP1-201ENST00000556181 766 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 AC005277.2-201ENST00000617898 390 ntBASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RIMBP3Q9UFD9 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RIMBP3Q9UFD9 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RIMBP3Q9UFD9 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RIMBP3Q9UFD9 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RIMBP3Q9UFD9 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
RIMBP3Q9UFD9 HERC2P8-202ENST00000564334 3705 ntBASIC10.21□□□□□ -0.77
RIMBP3Q9UFD9 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
RIMBP3Q9UFD9 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 AFAP1-202ENST00000360265 7479 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 ADIG-201ENST00000373348 430 ntTSL 2 BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 LSM5-203ENST00000409782 649 ntTSL 5 BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 AP000662.1-201ENST00000530952 487 ntBASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 AC015802.2-201ENST00000589690 189 ntBASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 FBXL21-201ENST00000297158 1305 ntBASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 AF121897.1-201ENST00000411867 3980 ntBASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 AL161756.3-201ENST00000641216 2071 ntBASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
RIMBP3Q9UFD9 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 AC130365.1-201ENST00000530524 1553 ntBASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
RIMBP3Q9UFD9 RN7SKP62-201ENST00000384539 329 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms