Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 AC091544.5-201ENST00000620192 3815 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 AL354854.1-201ENST00000455940 1363 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 SNORA51.1-201ENST00000363243 140 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 AL031985.1-201ENST00000392713 418 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 DEFA11P-201ENST00000446470 261 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 SNORA70D-201ENST00000578836 135 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 FAM72A-208ENST00000607379 1139 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 AP001264.1-201ENST00000620602 703 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 AC034229.6-201ENST00000623704 224 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 AP000577.1-201ENST00000624366 878 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 AC027348.2-201ENST00000624375 642 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 AC125603.4-201ENST00000621942 2699 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.05□□□□□ -1.12
SNED1Q8TER0 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
SNED1Q8TER0 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SNED1Q8TER0 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 RN7SKP271-201ENST00000410528 320 ntBASIC8.04□□□□□ -1.12
SNED1Q8TER0 Z68694.1-201ENST00000413929 841 ntBASIC8.04□□□□□ -1.12
SNED1Q8TER0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 AL590004.3-202ENST00000445883 451 ntBASIC8.04□□□□□ -1.12
SNED1Q8TER0 PPIAP27-201ENST00000453800 265 ntBASIC8.04□□□□□ -1.12
SNED1Q8TER0 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 LDHAP1-201ENST00000509421 992 ntBASIC8.04□□□□□ -1.12
SNED1Q8TER0 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 AP005136.2-201ENST00000583253 1049 ntBASIC8.04□□□□□ -1.12
SNED1Q8TER0 AC008507.3-201ENST00000585753 472 ntBASIC8.04□□□□□ -1.12
SNED1Q8TER0 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 U1.41-201ENST00000617626 165 ntBASIC8.04□□□□□ -1.12
SNED1Q8TER0 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.04□□□□□ -1.12
SNED1Q8TER0 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SNED1Q8TER0 HSPD1P4-201ENST00000547203 1702 ntBASIC8.04□□□□□ -1.12
SNED1Q8TER0 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.03□□□□□ -1.12
SNED1Q8TER0 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNED1Q8TER0 AL451046.1-201ENST00000406097 534 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 RN7SKP229-201ENST00000410465 302 ntBASIC8.03□□□□□ -1.12
SNED1Q8TER0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms