Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SYPL1P2-201ENST00000582878 727 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.75□□□□□ -1.17
CCNA1P78396 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.75□□□□□ -1.17
CCNA1P78396 AC026951.2-201ENST00000613847 241 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 MIR6721-201ENST00000617181 87 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.75□□□□□ -1.17
CCNA1P78396 AL596275.2-203ENST00000641951 371 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CCNA1P78396 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.75□□□□□ -1.17
CCNA1P78396 EPS15P1-202ENST00000459691 2071 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CCNA1P78396 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CCNA1P78396 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 AP002364.1-201ENST00000623330 3386 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CCNA1P78396 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
CCNA1P78396 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CCNA1P78396 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CCNA1P78396 RN7SKP15-201ENST00000364742 309 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 AL359694.1-201ENST00000403247 604 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.74□□□□□ -1.17
CCNA1P78396 AL663061.1-201ENST00000416625 580 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 VN1R3-201ENST00000418822 919 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.74□□□□□ -1.17
CCNA1P78396 AC099782.1-201ENST00000425889 474 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.74□□□□□ -1.17
CCNA1P78396 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.74□□□□□ -1.17
CCNA1P78396 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.74□□□□□ -1.17
CCNA1P78396 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.74□□□□□ -1.17
CCNA1P78396 AC055733.3-201ENST00000505214 523 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.74□□□□□ -1.17
CCNA1P78396 AL845552.1-201ENST00000556820 323 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.74□□□□□ -1.17
CCNA1P78396 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.74□□□□□ -1.17
CCNA1P78396 AL589765.6-201ENST00000601909 549 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.74□□□□□ -1.17
CCNA1P78396 uc_338.31-201ENST00000615595 186 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 AC114546.4-201ENST00000624413 369 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.74□□□□□ -1.17
CCNA1P78396 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 ASNSP6-201ENST00000592770 1618 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 AC009948.3-201ENST00000603415 1798 ntBASIC7.74□□□□□ -1.17
CCNA1P78396 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.74□□□□□ -1.17
CCNA1P78396 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CCNA1P78396 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.73□□□□□ -1.17
CCNA1P78396 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
CCNA1P78396 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.73□□□□□ -1.17
CCNA1P78396 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CCNA1P78396 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.73□□□□□ -1.17
CCNA1P78396 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
CCNA1P78396 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CCNA1P78396 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 RNU1-55P-201ENST00000365510 158 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 RN7SKP269-201ENST00000365545 319 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 U3.52-201ENST00000384034 216 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CCNA1P78396 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CCNA1P78396 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.73□□□□□ -1.17
CCNA1P78396 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CCNA1P78396 KCTD9P1-201ENST00000430462 1167 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 PSMD10P2-201ENST00000432890 672 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 POU5F1P5-201ENST00000445059 658 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.73□□□□□ -1.17
CCNA1P78396 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.73□□□□□ -1.17
CCNA1P78396 AC091874.2-201ENST00000505889 720 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CCNA1P78396 AC135983.3-201ENST00000528049 1226 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 AC006512.2-201ENST00000543250 486 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.73□□□□□ -1.17
CCNA1P78396 AC092718.4-201ENST00000566639 716 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.73□□□□□ -1.17
CCNA1P78396 AL078623.1-201ENST00000602702 907 ntBASIC7.73□□□□□ -1.17
CCNA1P78396 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms