Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 FOLH1B-202ENST00000529567 2145 ntBASIC6.77□□□□□ -1.33
PACSIN3Q9UKS6 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PACSIN3Q9UKS6 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.77□□□□□ -1.33
PACSIN3Q9UKS6 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
PACSIN3Q9UKS6 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PACSIN3Q9UKS6 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PACSIN3Q9UKS6 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PACSIN3Q9UKS6 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.77□□□□□ -1.33
PACSIN3Q9UKS6 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 VEZF1P1-201ENST00000423931 1541 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 HSPA8P19-201ENST00000505359 1517 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC007114.2-201ENST00000576014 4281 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 RN7SKP211-201ENST00000363328 315 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 RN7SKP36-201ENST00000363997 312 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 NPM1P31-201ENST00000399021 764 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 SNX18P13-201ENST00000412442 529 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC231533.2-201ENST00000419045 978 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 CLIC4P3-201ENST00000422221 752 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 GAPDHP73-201ENST00000423411 1007 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AL353803.3-201ENST00000444641 335 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 MTCO1P55-201ENST00000489829 745 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 RN7SKP242-201ENST00000515967 289 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 OR7E154P-201ENST00000525174 932 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 OR4A21P-201ENST00000532759 944 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC016144.1-201ENST00000548175 1087 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AL031429.2-201ENST00000602605 649 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AL390058.1-201ENST00000603834 629 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 uc_338.21-201ENST00000622458 147 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AL139254.3-201ENST00000641097 674 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC130456.1-201ENST00000565085 1363 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 OR51C1P-202ENST00000641159 1444 ntBASIC6.76□□□□□ -1.33
PACSIN3Q9UKS6 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 AL357556.1-201ENST00000421884 1388 ntBASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PACSIN3Q9UKS6 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms