Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC023886.2-201ENST00000321285 411 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 SNORA70H-201ENST00000383910 135 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 SNORA70J-201ENST00000384182 135 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 NHP2P2-201ENST00000396362 460 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 BMP6P1-201ENST00000431230 679 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 LDHAP2-201ENST00000437325 985 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 DNAJC19P5-201ENST00000443295 316 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 SETP4-201ENST00000455717 868 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 SCARNA18.2-201ENST00000516882 84 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC122713.1-201ENST00000518368 1015 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 OR4A6P-201ENST00000534364 970 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 MIR1273F-201ENST00000580581 99 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC011193.2-201ENST00000582638 367 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC007255.2-201ENST00000604053 631 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC104117.5-201ENST00000606195 547 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC087894.3-201ENST00000623682 349 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC026108.1-201ENST00000635444 547 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 AC022905.1-201ENST00000503430 3048 ntBASIC7.16□□□□□ -1.26
CCDC50Q8IVM0 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC018804.1-201ENST00000430381 618 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 RPL14P5-201ENST00000436474 730 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 TUBBP11-201ENST00000472255 252 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC024614.1-201ENST00000577546 307 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 RN7SL199P-201ENST00000578752 281 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 RN7SL656P-201ENST00000579044 281 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 RN7SL404P-201ENST00000582421 281 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 MIR4420-201ENST00000583944 77 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 MIR4786-201ENST00000583954 80 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC004839.1-201ENST00000610269 501 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC068234.2-201ENST00000619646 522 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 KYNUP2-201ENST00000582280 1329 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 Z95114.1-201ENST00000624264 14574 ntBASIC7.15□□□□□ -1.26
CCDC50Q8IVM0 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.27
CCDC50Q8IVM0 AL359694.2-201ENST00000567753 1615 ntBASIC7.15□□□□□ -1.27
CCDC50Q8IVM0 AL451064.2-201ENST00000623514 1654 ntBASIC7.15□□□□□ -1.27
CCDC50Q8IVM0 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.15□□□□□ -1.27
CCDC50Q8IVM0 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCDC50Q8IVM0 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CCDC50Q8IVM0 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCDC50Q8IVM0 AC092646.2-201ENST00000431242 2095 ntBASIC7.15□□□□□ -1.27
CCDC50Q8IVM0 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.15□□□□□ -1.27
CCDC50Q8IVM0 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCDC50Q8IVM0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.14□□□□□ -1.27
CCDC50Q8IVM0 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC50Q8IVM0 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC50Q8IVM0 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCDC50Q8IVM0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
CCDC50Q8IVM0 RNA5SP53-201ENST00000391299 120 ntBASIC7.14□□□□□ -1.27
CCDC50Q8IVM0 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.14□□□□□ -1.27
CCDC50Q8IVM0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms