Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 NEPNP-201ENST00000404786 1371 ntBASIC7.03□□□□□ -1.28
HTTP42858 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
HTTP42858 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC7.03□□□□□ -1.28
HTTP42858 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
HTTP42858 TSPAN14-206ENST00000372164 5476 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.03□□□□□ -1.28
HTTP42858 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
HTTP42858 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 AC083806.2-201ENST00000617795 2685 ntBASIC7.03□□□□□ -1.28
HTTP42858 RNA5SP234-201ENST00000363916 119 ntBASIC7.03□□□□□ -1.28
HTTP42858 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HTTP42858 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.03□□□□□ -1.28
HTTP42858 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.03□□□□□ -1.28
HTTP42858 TRIM60P16-201ENST00000444048 694 ntBASIC7.03□□□□□ -1.28
HTTP42858 AP001858.2-201ENST00000536213 601 ntBASIC7.03□□□□□ -1.28
HTTP42858 uc_338.18-201ENST00000615451 175 ntBASIC7.03□□□□□ -1.28
HTTP42858 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
HTTP42858 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HTTP42858 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
HTTP42858 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.28
HTTP42858 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC7.02□□□□□ -1.29
HTTP42858 AC007342.5-201ENST00000571340 2142 ntBASIC7.02□□□□□ -1.29
HTTP42858 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 TEP1-209ENST00000556935 7643 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.02□□□□□ -1.29
HTTP42858 AL606490.8-201ENST00000441624 319 ntBASIC7.02□□□□□ -1.29
HTTP42858 SPRYD7P1-201ENST00000443861 570 ntBASIC7.02□□□□□ -1.29
HTTP42858 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.02□□□□□ -1.29
HTTP42858 RPS29P22-201ENST00000472363 168 ntBASIC7.02□□□□□ -1.29
HTTP42858 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.02□□□□□ -1.29
HTTP42858 GTF2IP6-201ENST00000583143 541 ntBASIC7.02□□□□□ -1.29
HTTP42858 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.02□□□□□ -1.29
HTTP42858 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC7.02□□□□□ -1.29
HTTP42858 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.02□□□□□ -1.29
HTTP42858 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.02□□□□□ -1.29
HTTP42858 AC022404.1-201ENST00000555320 273 ntBASIC7.02□□□□□ -1.29
HTTP42858 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.02□□□□□ -1.29
HTTP42858 MIR6820-201ENST00000611508 62 ntBASIC7.02□□□□□ -1.29
HTTP42858 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.02□□□□□ -1.29
HTTP42858 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC7.02□□□□□ -1.29
HTTP42858 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HTTP42858 NCAM1-229ENST00000621518 4922 ntTSL 5 BASIC7.02□□□□□ -1.29
HTTP42858 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HTTP42858 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
HTTP42858 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
HTTP42858 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC7.01□□□□□ -1.29
HTTP42858 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.01□□□□□ -1.29
HTTP42858 CFL1P1-202ENST00000432948 411 ntBASIC7.01□□□□□ -1.29
HTTP42858 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.01□□□□□ -1.29
HTTP42858 AC090616.1-201ENST00000583895 447 ntBASIC7.01□□□□□ -1.29
HTTP42858 AP002884.5-201ENST00000595053 1132 ntBASIC7.01□□□□□ -1.29
HTTP42858 AL731566.2-201ENST00000618971 317 ntBASIC7.01□□□□□ -1.29
HTTP42858 AL357562.1-201ENST00000624911 609 ntBASIC7.01□□□□□ -1.29
HTTP42858 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
HTTP42858 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC7.01□□□□□ -1.29
HTTP42858 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
HTTP42858 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.01□□□□□ -1.29
HTTP42858 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.01□□□□□ -1.29
HTTP42858 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC7.01□□□□□ -1.29
HTTP42858 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
HTTP42858 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 AL139148.1-201ENST00000427122 680 ntBASIC7.01□□□□□ -1.29
HTTP42858 EEF1B2P5-201ENST00000444820 548 ntBASIC7.01□□□□□ -1.29
HTTP42858 RN7SL705P-201ENST00000481678 294 ntBASIC7.01□□□□□ -1.29
HTTP42858 RN7SL547P-201ENST00000490793 290 ntBASIC7.01□□□□□ -1.29
HTTP42858 OR5D15P-201ENST00000531671 942 ntBASIC7.01□□□□□ -1.29
HTTP42858 AL591767.3-201ENST00000554632 525 ntBASIC7.01□□□□□ -1.29
HTTP42858 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.01□□□□□ -1.29
HTTP42858 AC092681.3-201ENST00000609463 678 ntBASIC7.01□□□□□ -1.29
HTTP42858 AC022919.1-201ENST00000624979 626 ntBASIC7.01□□□□□ -1.29
HTTP42858 AC020978.8-201ENST00000571975 3022 ntBASIC7.01□□□□□ -1.29
HTTP42858 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HTTP42858 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.01□□□□□ -1.29
HTTP42858 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
HTTP42858 TRIM60P19-201ENST00000452879 1462 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms