Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ZNF658B-201ENST00000602828 3408 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 CUBNP3-201ENST00000457461 1784 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.2□□□□□ -1.1
UPF2Q9HAU5 DLEU2L-201ENST00000371086 3555 ntBASIC8.2□□□□□ -1.1
UPF2Q9HAU5 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 SNORA70.5-201ENST00000365519 135 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 RNU1-46P-201ENST00000384425 164 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 RPL23AP80-201ENST00000495605 424 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 MTND6P8-201ENST00000503471 522 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 AC117383.2-201ENST00000514722 322 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 IGHV1-14-201ENST00000523391 241 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 OR7E1P-201ENST00000533891 958 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 MIR3689C-201ENST00000581239 72 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 AL035410.2-201ENST00000604963 864 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 AC004241.2-201ENST00000614562 444 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 AL161420.1-201ENST00000619393 264 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 SAMMSON-214ENST00000641395 1264 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 AC090774.4-201ENST00000578888 1372 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
UPF2Q9HAU5 AC102941.1-201ENST00000567616 1537 ntBASIC8.19□□□□□ -1.1
UPF2Q9HAU5 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 CASC19-228ENST00000641414 1684 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 RACGAP1P-201ENST00000550663 1879 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AC007568.1-201ENST00000422912 471 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AC018804.1-201ENST00000430381 618 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 GOT2P2-201ENST00000450663 1251 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 MEF2AP1-201ENST00000454867 863 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 RN7SL228P-201ENST00000470060 303 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 RPL7P17-201ENST00000470927 724 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 SNRPCP20-201ENST00000588011 210 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AL136139.1-201ENST00000605568 222 ntBASIC8.18□□□□□ -1.1
UPF2Q9HAU5 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.18□□□□□ -1.1
UPF2Q9HAU5 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AL662795.2-201ENST00000624252 3706 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 RNA5SP350-201ENST00000363298 111 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 RNA5SP442-201ENST00000365050 107 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms