Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC074198.1-201ENST00000506546 1397 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AF131215.2-201ENST00000531549 1710 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SF3A3P1-201ENST00000446317 1477 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC069222.1-201ENST00000608028 3360 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC090643.1-201ENST00000623600 3100 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AL080312.1-201ENST00000256654 824 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 RNU6-623P-201ENST00000363143 105 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 Y_RNA.201-201ENST00000364052 96 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 RNU6-207P-201ENST00000384137 107 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AP002784.2-201ENST00000397300 549 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 NUS1P4-201ENST00000401550 585 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 OR4F7P-201ENST00000402444 931 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 OR4F1P-201ENST00000405102 938 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 BTF3L4P1-201ENST00000413813 468 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC023141.10-201ENST00000415634 200 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 OR4F2P-201ENST00000424047 938 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 RPS3AP44-201ENST00000425466 790 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 RNF11P2-201ENST00000427702 440 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC005040.1-201ENST00000437783 482 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC117392.1-201ENST00000487061 596 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 NPY6R-201ENST00000503807 1112 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 MTCYBP16-201ENST00000509187 1129 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 OR5BM1P-201ENST00000512021 366 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC011352.1-201ENST00000512300 793 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 SEC11B-201ENST00000518383 499 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AP003385.2-201ENST00000524910 973 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 OR7E87P-201ENST00000532397 929 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 MTND4P33-201ENST00000556706 766 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AGGF1P7-201ENST00000562369 913 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC138749.2-201ENST00000566048 167 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC090415.1-201ENST00000581877 847 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AL583856.2-201ENST00000606298 543 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AL353600.1-201ENST00000608148 251 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC026124.2-201ENST00000621847 656 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC104985.3-201ENST00000623479 597 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 FRG1DP-201ENST00000635586 771 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AC008937.3-201ENST00000606813 1700 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NUP43Q8NFH3 SAMMSON-222ENST00000641901 2727 ntBASIC7.03□□□□□ -1.28
NUP43Q8NFH3 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms