Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGB1P1B2RPK0 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGB1P1B2RPK0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
HMGB1P1B2RPK0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
HMGB1P1B2RPK0 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.09□□□□□ -1.27
HMGB1P1B2RPK0 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
HMGB1P1B2RPK0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 MIR365B-201ENST00000362317 111 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 RNU6-729P-201ENST00000384399 107 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 MT-RNR1-201ENST00000389680 954 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 RNA5SP105-201ENST00000391123 113 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC020983.1-201ENST00000417063 543 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC113412.1-201ENST00000425840 504 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AL355149.1-201ENST00000438396 882 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 CYCSP51-201ENST00000443545 318 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 LINC01830-201ENST00000450551 636 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 RPL31P53-201ENST00000457065 348 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 PLA2G12AP1-201ENST00000497678 568 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 GSTO3P-201ENST00000504733 718 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC106800.3-201ENST00000511389 308 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 RN7SKP248-201ENST00000516278 305 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 IGLV1-62-201ENST00000518003 441 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 OR5M4P-201ENST00000529436 925 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 WARSP1-201ENST00000533936 454 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AL109628.1-201ENST00000556877 366 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC024270.1-201ENST00000559181 404 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 DNM1P31-201ENST00000564149 696 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AL592494.3-201ENST00000609485 464 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC073488.5-201ENST00000631993 754 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AC125232.1-201ENST00000452554 1408 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 MARK2P10-201ENST00000454959 1437 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 RBPJP2-201ENST00000618187 1444 ntBASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGB1P1B2RPK0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 AP003486.1-201ENST00000525716 3994 ntBASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 DDX10P2-201ENST00000417796 2614 ntBASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 KRT18P52-201ENST00000404956 846 ntBASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 RPL3P8-201ENST00000432928 1191 ntBASIC7.07□□□□□ -1.28
HMGB1P1B2RPK0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 236.1 ms