Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 NCOA4P3-201ENST00000513203 1877 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 MITF-203ENST00000328528 4680 ntTSL 5 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 RPSAP32-201ENST00000432681 526 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 AL354893.1-201ENST00000433735 348 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 IGKV2-4-201ENST00000523070 340 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 AC124891.1-201ENST00000536322 519 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 TDGP1-201ENST00000543961 1229 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 AC015818.6-201ENST00000584274 634 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 WBP1LP12-201ENST00000604449 331 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 RPSAP68-201ENST00000625020 438 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 EEF1A1P12-201ENST00000443590 1346 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 AC005702.3-201ENST00000585345 1447 ntBASIC9.84□□□□□ -0.83
HFM1A2PYH4 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
HFM1A2PYH4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC9.84□□□□□ -0.83
HFM1A2PYH4 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 RN7SKP15-201ENST00000364742 309 ntBASIC9.83□□□□□ -0.84
HFM1A2PYH4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 MIR1282-201ENST00000408865 101 ntBASIC9.83□□□□□ -0.84
HFM1A2PYH4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 GAPDHP16-201ENST00000448152 962 ntBASIC9.83□□□□□ -0.84
HFM1A2PYH4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 AC083906.1-201ENST00000509298 406 ntBASIC9.83□□□□□ -0.84
HFM1A2PYH4 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 AL078623.1-201ENST00000602702 907 ntBASIC9.83□□□□□ -0.84
HFM1A2PYH4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 AL355480.1-201ENST00000629041 99 ntBASIC9.83□□□□□ -0.84
HFM1A2PYH4 5S_rRNA.29-201ENST00000641250 107 ntBASIC9.83□□□□□ -0.84
HFM1A2PYH4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 NEK2P2-201ENST00000438441 1338 ntBASIC9.83□□□□□ -0.84
HFM1A2PYH4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 SFTPD-AS1-201ENST00000608229 5001 ntBASIC9.83□□□□□ -0.84
HFM1A2PYH4 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.83□□□□□ -0.84
HFM1A2PYH4 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
HFM1A2PYH4 MTHFD1P1-201ENST00000413059 2764 ntBASIC9.83□□□□□ -0.84
HFM1A2PYH4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HFM1A2PYH4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
HFM1A2PYH4 AL049697.3-201ENST00000406493 982 ntBASIC9.82□□□□□ -0.84
HFM1A2PYH4 MIR1275-201ENST00000408770 80 ntBASIC9.82□□□□□ -0.84
HFM1A2PYH4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC9.82□□□□□ -0.84
HFM1A2PYH4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC9.82□□□□□ -0.84
HFM1A2PYH4 AC118758.1-202ENST00000454719 225 ntBASIC9.82□□□□□ -0.84
HFM1A2PYH4 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC9.82□□□□□ -0.84
HFM1A2PYH4 OR7E22P-201ENST00000478335 1035 ntBASIC9.82□□□□□ -0.84
HFM1A2PYH4 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC9.82□□□□□ -0.84
HFM1A2PYH4 RPL3P13-201ENST00000550415 216 ntBASIC9.82□□□□□ -0.84
HFM1A2PYH4 AC026898.1-201ENST00000586404 571 ntBASIC9.82□□□□□ -0.84
HFM1A2PYH4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC9.82□□□□□ -0.84
HFM1A2PYH4 AL359704.2-201ENST00000604335 521 ntBASIC9.82□□□□□ -0.84
HFM1A2PYH4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC9.82□□□□□ -0.84
HFM1A2PYH4 AC012653.2-201ENST00000621880 420 ntBASIC9.82□□□□□ -0.84
HFM1A2PYH4 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC9.82□□□□□ -0.84
HFM1A2PYH4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms