Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CUEDC1Q9NWM3 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 RNA5SP336-201ENST00000364189 117 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 RNA5SP141-201ENST00000364543 120 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 MIR614-201ENST00000385082 90 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AL356057.2-201ENST00000403318 432 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 RPL3P4-201ENST00000417615 423 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC007790.1-201ENST00000439081 782 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 MTCYBP34-201ENST00000439552 670 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 ARAFP2-201ENST00000440565 559 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 PSMA6P2-201ENST00000457574 686 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC107015.1-201ENST00000466902 747 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 KCNAB1-AS1-201ENST00000467794 456 ntTSL 2 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC104164.4-201ENST00000483456 493 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 RPL23AP10-201ENST00000489946 466 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC023424.2-201ENST00000493479 777 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC244505.1-201ENST00000502642 307 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC117522.3-201ENST00000507974 584 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 RNU6-718P-201ENST00000516166 105 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 RNA5SP159-201ENST00000517161 103 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC103770.1-201ENST00000517884 833 ntTSL 3 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AP003392.2-201ENST00000527269 208 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC018653.2-201ENST00000540190 238 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 OR11H3P-201ENST00000554547 982 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 VN1R65P-201ENST00000566443 808 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 RN7SL49P-201ENST00000581392 298 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 SRP68P1-201ENST00000584247 269 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC096708.1-201ENST00000584419 658 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AL159169.3-201ENST00000608871 561 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 ELMO2P1-202ENST00000614283 794 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AL731556.2-201ENST00000615610 770 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC008443.7-201ENST00000622195 246 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AL158206.1-201ENST00000563205 1965 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 Z97200.1-201ENST00000606154 2045 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 Z97832.2-201ENST00000605896 4261 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 RN7SKP23-201ENST00000625159 4301 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 AC092326.2-201ENST00000624772 1561 ntBASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUEDC1Q9NWM3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC8.17□□□□□ -1.1
CUEDC1Q9NWM3 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms