Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC040162.2-201ENST00000573092 157 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC006557.4-201ENST00000585516 830 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AL592221.1-201ENST00000605266 382 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC069499.2-201ENST00000610665 382 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 PART1_2.1-201ENST00000612397 250 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC138904.2-201ENST00000614412 107 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC245028.3-201ENST00000618197 285 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC079456.1-201ENST00000624010 480 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC010608.2-201ENST00000624830 470 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 AC009948.5-201ENST00000624360 4406 ntBASIC7.08□□□□□ -1.28
ATG4DQ86TL0 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
ATG4DQ86TL0 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC130464.1-201ENST00000416201 1500 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 MFSD8-227ENST00000641393 4069 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 Y_RNA.88-201ENST00000363029 99 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 RNU4-4P-201ENST00000364588 130 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 SSX9-201ENST00000376909 591 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AL513325.1-201ENST00000417716 1034 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 RPL4P4-201ENST00000422486 1284 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 MTND4P20-201ENST00000424125 869 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AJ239321.1-201ENST00000424255 564 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC073052.1-201ENST00000440417 714 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC104978.1-201ENST00000449387 391 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 MTCYBP1-201ENST00000454315 1119 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC131233.1-201ENST00000479200 955 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC026254.1-201ENST00000479473 431 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 RPL7P40-201ENST00000481703 745 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 RN7SL241P-201ENST00000482973 236 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC116353.2-201ENST00000505332 712 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 NTAN1P2-201ENST00000515730 940 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC103833.1-201ENST00000517442 172 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AP000619.2-201ENST00000546014 969 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC092868.1-201ENST00000557949 802 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 ANP32BP3-201ENST00000559213 706 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 MRPL45P2-203ENST00000573318 473 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 MIR4258-201ENST00000580920 91 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 MIR3689C-201ENST00000581239 72 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 CBX3P2-202ENST00000583365 535 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 EIF1P5-201ENST00000585002 234 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC008759.1-201ENST00000589783 983 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 SLC25A36P1-201ENST00000590111 465 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC007349.4-201ENST00000608114 532 ntBASIC7.07□□□□□ -1.28
ATG4DQ86TL0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms